DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9143 and CG7878

DIOPT Version :9

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:640 Identity:152/640 - (23%)
Similarity:255/640 - (39%) Gaps:182/640 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 LRKQ---KKSKGKENDNSEESSDEH----AADRFA----LLRPPPSD------------DEEEVV 184
            :|||   ...:|::.||.:..|:|.    ..||:.    ...|..|:            |.|.:.
  Fly   150 VRKQVTNSGDRGQDRDNRDHGSNERYDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALN 214

  Fly   185 KAEDSADQ---------QESTDEEAPELVPISTGEAEDMSAWNGL----------------GVP- 223
            ||..:|..         .::..:||||:..::..|.|.:...|..                .:| 
  Fly   215 KASIAATAARWSKCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPN 279

  Fly   224 ------------ASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLA 276
                        ..:|..:.:.||..|:.||:...|..:.| .|::|.|:||:||||||   :|.
  Fly   280 PVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQG-HDMIGIAQTGTGKTLAF---LLP 340

  Fly   277 GIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPL 341
            |::..:.::...|.|....|                                             
  Fly   341 GMIHTEYQSTPRGTRGGANV--------------------------------------------- 360

  Fly   342 YGLVLTPTRELAVQVKNHLVAAAKYT--GIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWEL 404
              |||.||||||:|::   :...||:  |::...::||.....|...|.:..:|::.|||||.:|
  Fly   361 --LVLAPTRELALQIE---MEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDL 420

  Fly   405 YAQGNRHLGKIEDVS---FLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLTL 466
            .      :..:.|||   :||:||.|||::.|...::|.::..:..|      ||..:.|||   
  Fly   421 I------MANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPD------RQTIMTSAT--- 470

  Fly   467 VHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQTLTESRLLCPID 531
               .|..:::    ....::|..:...:.||            |:.::....|.:   :|:....
  Fly   471 ---WPPGVRR----LAQSYMKNPIQVCVGSL------------DLAATHSVKQII---KLMEDDM 513

  Fly   532 HKDYHLYYFIQR--HPGRTIVFCN---SIDCVKRLATLFGLL-DCNPLPLHANMIQKQRLKNLER 590
            .|...:..|::.  ...:.|:||.   ..|.:....||.|.: .|    :|.|..|..|.:.:..
  Fly   514 DKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQC----IHGNRDQMDREQAIAD 574

  Fly   591 FRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGEVK 655
            .:.....:|:|||||:|||||.::.|||:|..|...|.||||.|||.||.:.|.::.|....:..
  Fly   575 IKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWA 639

  Fly   656 SYVKLYKTLERTE-DLPLFPILERFMGAVRERVNLARDLDKEELKLKRVQSERGW 709
            ...:|.:.|:..| ::|            .|..|:||..  :.:|.||.....|:
  Fly   640 MAKELIEILQEAEQEVP------------DELHNMARRF--KAMKDKRAAEGGGF 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 BLVR <125..191 CDD:283923 16/70 (23%)
SrmB 201..747 CDD:223587 133/550 (24%)
P-loop_NTPase 217..465 CDD:304359 68/281 (24%)
HELICc 531..648 CDD:238034 41/122 (34%)
CG7878NP_649767.1 KH-I 92..150 CDD:238053 152/640 (24%)
DEADc 288..489 CDD:238167 68/276 (25%)
DEXDc 298..505 CDD:214692 70/294 (24%)
Helicase_C 514..624 CDD:278689 39/113 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451480
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.