Protein Alignment CG9143 and Gem3

DIOPT Version :10

• Sequence 1: NP_611467.1
• Gene: CG9143 / 37296
• FlyBaseID: FBgn0287774
• Length: 813
• Species: Drosophila melanogaster
• Sequence 2: NP_524019.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Alignment Length: 633
• Identity: 149/633 - (23%)
• Similarity: 253/633 - (39%)
• Gaps: 133/633 - (21%)

  Fly   180 EEEVVKAEDSADQQESTDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQAL 244
            |.|:  |...|..:|.:.:.||..|          ..:..|.:..::|..|....|.|||:|||.
  Fly     2 EREI--AHSLAGGEERSSDVAPGQV----------KTFEELRLYRNLLNGLKRNNFVTPTKIQAA 54

  Fly   245 TLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHE 309
            .:|.|: .|.|::..:::|:||||.:.|    .:::....||            .||
  Fly    55 AIPMAL-AKMDLIIQSKSGTGKTLIYVI----AVVQSFNPNI------------NQP-------- 94

  Fly   310 LTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKN---HLVAAAKYTGIRV 371
                                            :.:::.||||||:||::   ||  ...:...:.
  Fly    95 --------------------------------HAMIVVPTRELAIQVQDTFFHL--CKSFRDFKC 125

  Fly   372 AAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVS---FLVIDETDRMVE-K 432
            :|..||..|||..:.:.: ..:::.|||||..||.      .::.|||   .||:||.|::.: |
  Fly   126 SAFIGGTDVAKDRKRMNE-SRVIIGTPGRLLHLYE------NRVFDVSKLRLLVLDEADQLYQTK 183

  Fly   433 GHFEELRSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVDQKIESL 497
            .....:..|::.:..:.|        :.:.:.|...:|.:.:.|  |..:|..:..:     |..
  Fly   184 SLQHTVSKLIEAMPKNRQ--------IIACSATYDQNLDERLAK--VMDKPMLISNS-----ERA 233

  Fly   498 IEELGISQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRTIVFCNS---IDCVK 559
            ...|||.|    .:....|...::.|.||...|..:.::...:.|     .|:|.:|   .|..|
  Fly   234 TVLLGIRQ----FVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQ-----AIIFASSQMRADSYK 289

  Fly   560 RLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPR 624
            ...|..| :||:  .:...|.|.:||...|.:|:....:|:|||:.|||:|.|:...||:...|:
  Fly   290 NYLTASG-IDCH--LISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQ 351

  Fly   625 TSENYVHRSGRTARANKHGITVMFM----EPGEVKSYVKLYKTLERTEDLPLFPILERFMGAVRE 685
            ....|:||.||..|....||.:.|:    |....:...|...|.....:.|..|:...|.....|
  Fly   352 DHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSKKIATAWSVLEFPKEPMPNEFNFWDFE 416

  Fly   686 RVNLARDLDKEELKLKR----VQSERGWMKKHAEEMDMIIDGYNDESGSDQDED--PFVIE--RR 742
            :.|....: |||..|:.    ::..|......|..:| :.:...|:.|..:|.|  |..:|  ..
  Fly   417 KYNFDYYI-KEENPLQEMPMPIKENRSKENVDASSVD-LENLQKDQDGKRRDPDKLPVALENVET 479

  Fly   743 RNRLRVETV----RAQLNALLAQPIFPRGFSFKYPNSEAAQLATSHTQ 786
            :..|.:|.:    ....|..:.:....|....|..||:|....|:.|:
  Fly   480 QKELELENLPESSHNNKNLRVKEKEIVRQGKLKETNSKAGGSKTNKTE 527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9143	NP_611467.1	DEADc_DDX24	226..510	CDD:350704	67/290 (23%)
		SF2_C_DEAD	521..648	CDD:350174	40/129 (31%)
Gem3	NP_524019.1	SrmB	26..409	CDD:440279	115/475 (24%)