DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and Ddx24

DIOPT Version :9

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_954550.1 Gene:Ddx24 / 373065 RGDID:727929 Length:851 Species:Rattus norvegicus


Alignment Length:905 Identity:330/905 - (36%)
Similarity:478/905 - (52%) Gaps:165/905 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KQKTAKPPKLLKGAAKEPALSKAENWQKVKIKGHVISDDGGGFEGLIGLEVLKDYDASLVKSSQK 69
            |:..:||....:|..:...:.....|::|.|..::.:|  |..:.|:..|.|.||  .|||    
  Rat     4 KETKSKPKSASRGTFQRKGIKVVGKWKQVTIDPNLFAD--GQMDDLVCFEELTDY--RLVK---- 60

  Fly    70 RTTSRNPDR----ERKLKKKKRKVSKGDEEESSESSSE------SESEDEVAV----AARTSKKA 120
                 ||.|    |...|:|.:.||:.:|||..||||.      .:..|.:.|    ||:...:.
  Rat    61 -----NPSRLFSDETTKKRKAQAVSEEEEEEEGESSSPKKKIKLKKQRDAILVAEGSAAQDECEG 120

  Fly   121 RLAERHAQ------KMQKL--REKREKRKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPS 177
            :.:|..||      ..||:  .......:.:.::||:|||:.           .|.|....|   
  Rat   121 KASEPGAQGEITVCSDQKVGGATSESLAQTVPRKKKNKGKKK-----------LDTFQSTAP--- 171

  Fly   178 DDEEEVVKAEDSADQQESTDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQ 242
                             ...::|...:|....:..|:|||..|.||.::||||...||..||.||
  Rat   172 -----------------KVPKKAKTWMPEVQDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQ 219

  Fly   243 ALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIME---LKQRNIRSGIRKAPKV-------- 296
            ||||..||..|.||||||||||||||||.|||:..:::   :|...|.|.....|::        
  Rat   220 ALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVLQWHKMKAPPIPSSAGVPPRLGAAAHRGS 284

  Fly   297 -------KGQQPEPAADEHELTP-------------------------------PPEELDHVSGA 323
                   .|..||.|..|.|..|                               |...::.....
  Rat   285 PCKDGAKSGVLPEEATIETEAQPSDSGVQATAKAGASAASAQAGLFCDDDAGEGPSSLVEEKQSK 349

  Fly   324 SDEESDAEEQAQRV---------------QTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAA 373
            ..||...||||.::               :.||.||||||||||||||:.|:.|.||:|||..|.
  Rat   350 DREEKLDEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGINTAI 414

  Fly   374 IFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEEL 438
            :.||::..||:|:|.:.|:||:|||||||||..:.:.||..:..:..|||||.||||||.||.||
  Rat   415 LVGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKDHFAEL 479

  Fly   439 RSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDH-MQKRNVGKRPKFVKQTVDQKIESLIEELG 502
            ..||::|| |.|....||..|:||||||||..|.. :.|::|.|..|      ..|::.|::::|
  Rat   480 SQLLEMLN-DSQYNPNRQTLVFSATLTLVHQAPARILHKKHVKKMDK------TAKLDLLMQKIG 537

  Fly   503 I-SQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRTIVFCNSIDCVKRLATLFG 566
            : .:||::|:|.::.|.:||||:::.|..|.||.:||||:.::|||::||.|||.|:|||:.|..
  Rat   538 MRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLK 602

  Fly   567 LLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVH 631
            :||..||.|||.|.|||||:|||:|......:|:||||||||||||.|:||||||||||||.|:|
  Rat   603 VLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIH 667

  Fly   632 RSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTEDLPLFPILERFMGAVRERVNLARDLDKE 696
            ||||||||...|:::|.:.|.:|.::.|:||||::.||:||||:..::|..|:||:.|||.::|.
  Rat   668 RSGRTARATSEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQSKYMDMVKERIRLARQIEKA 732

  Fly   697 ELKLKRVQSERGWMKKHAEEMDMIIDGYNDESG-SDQDEDPFVIERRRNRLRVETVRAQLNALLA 760
            |.:..:......|:::.|..:::.::....:.| :||.|     ||||.: :::.::.:|..||:
  Rat   733 EYRNFQACLHNSWIEQAAAALEIELEEEMYKGGKADQQE-----ERRRQK-QMKILKQELRHLLS 791

  Fly   761 QPIFPRGFSFKYPNSEAAQLATSHTQS--------AVETMKAAIEDQKQAKKDRNKRKRN 812
            ||:|......:||           |||        |...:::|:....:.|:.|.|.|.:
  Rat   792 QPLFQENLKTRYP-----------TQSGRPPQPVVAPRNVESALSCLSRQKRRRKKPKEH 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 BLVR <125..191 CDD:283923 12/73 (16%)
SrmB 201..747 CDD:223587 263/612 (43%)
P-loop_NTPase 217..465 CDD:304359 129/311 (41%)
HELICc 531..648 CDD:238034 74/116 (64%)
Ddx24NP_954550.1 SrmB 191..735 CDD:223587 251/550 (46%)
P-loop_NTPase 194..505 CDD:304359 129/311 (41%)
Helicase_C 567..675 CDD:278689 71/107 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343252
Domainoid 1 1.000 180 1.000 Domainoid score I3430
eggNOG 1 0.900 - - E2759_KOG0347
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10702
Inparanoid 1 1.050 494 1.000 Inparanoid score I1342
OMA 1 1.010 - - QHG53695
OrthoDB 1 1.010 - - D530431at33208
OrthoFinder 1 1.000 - - FOG0004383
OrthoInspector 1 1.000 - - oto97408
orthoMCL 1 0.900 - - OOG6_102605
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3667
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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