DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and pths

DIOPT Version :10

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_610090.1 Gene:pths / 35379 FlyBaseID:FBgn0032919 Length:507 Species:Drosophila melanogaster


Alignment Length:623 Identity:168/623 - (26%)
Similarity:282/623 - (45%) Gaps:152/623 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 MQKLREKREKRKELRKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQE 194
            |.:..|..:.:.:...:::..|.|.:..:|.::....|..|.|     ..|::....:|:|::|:
  Fly     1 MSETSEDEQTQLQTSDEEEDLGSEEEQEDEDNNHKEGDSEAAL-----SGEDDKGSEDDAAEEQK 60

  Fly   195 STDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGA 259
            .|                    |..||:..::.:|..|..:|.|::||...:|.|:.| ||::|.
  Fly    61 LT--------------------WKDLGLNEALCQACDELKWKAPSKIQREAIPVALQG-KDVIGL 104

  Fly   260 AETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGAS 324
            ||||||||.||.:|:|..::|..||                                        
  Fly   105 AETGSGKTGAFALPILHALLENPQR---------------------------------------- 129

  Fly   325 DEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQ 389
                            .:.||||||||||.|:.....|.....||:...:.||:.:..|...|.:
  Fly   130 ----------------YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAK 178

  Fly   390 CPDIVVATPGRLWELYAQGNRHLG-----KIEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDE 449
            .|.|::||||||.:       ||.     .::.:.:||:||.||::......||..:||||    
  Fly   179 KPHIIIATPGRLVD-------HLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVL---- 232

  Fly   450 QKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSS 514
              ..:|:.|::|||:|                  |.||:         ::...:..|..|::::.
  Fly   233 --PRERRTFLFSATMT------------------KKVKK---------LQRASLKDPVKVEVSNK 268

  Fly   515 QQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRT-IVFCNSIDCVKRLATLFGLLDCNPLPLHAN 578
            .||.:.|.:|.|..|:.:||.:|.:.:....|.: ::||::.:...:.|.:...|....:|||..
  Fly   269 YQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQ 333

  Fly   579 MIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHG 643
            |.|.:||..|.:|:.....:||:||||:||||||:|:.|:::.:|..|::|:||.||||||.:.|
  Fly   334 MSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSG 398

  Fly   644 ITVMFMEPGEVKSY-VKLYKTLERT--EDLPLFPILERFMGAVRERVNLARDLDKEELKLKRVQS 705
            ..:..     |..| ::||:.:|..  :.|.|:...|..:.|::|||..|:...|  |:||.::.
  Fly   399 KAITL-----VSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAK--LELKDLED 456

  Fly   706 ERGWMKKHAEEMDMIIDGYNDESGSDQDEDPFVIERRR 743
            .||..|:..:..|              |.:.|...|:|
  Fly   457 TRGGHKRGGDTHD--------------DSENFTGARKR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 77/288 (27%)
SF2_C_DEAD 521..648 CDD:350174 47/127 (37%)
pthsNP_610090.1 SrmB 62..480 CDD:440279 155/555 (28%)

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