DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and eIF4A

DIOPT Version :9

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster


Alignment Length:497 Identity:124/497 - (24%)
Similarity:215/497 - (43%) Gaps:105/497 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 DDEEEVVKAEDSADQQESTDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQ 242
            ||..|:        .|:......||.|..||.. |....::.:.:...:||.:...||:.|:.||
  Fly     2 DDRNEI--------PQDGPASMEPEGVIESTWH-EVYDNFDDMNLREELLRGIYGYGFEKPSAIQ 57

  Fly   243 ALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADE 307
            ...:...:.| :|::..|::|:|||..|.|.:|        :.|.:.||                
  Fly    58 QRAIIPCVRG-RDVIAQAQSGTGKTATFSIAIL--------QQIDTSIR---------------- 97

  Fly   308 HELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVA 372
                                   |.||         |:|.||||||.|::..::|..:|..:...
  Fly    98 -----------------------ECQA---------LILAPTRELATQIQRVVMALGEYMKVHSH 130

  Fly   373 AIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEE 437
            |..||..|.:..|:|.....:||.||||::::.   ||.:.:.:.:...|:||.|.|:.:|..::
  Fly   131 ACIGGTNVREDARILESGCHVVVGTPGRVYDMI---NRKVLRTQYIKLFVLDEADEMLSRGFKDQ 192

  Fly   438 LRSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELG 502
            ::.:.|:|..|.|.      .:.|||:.     ||.::....     |::..|...::.  |||.
  Fly   193 IQDVFKMLPPDVQV------ILLSATMP-----PDVLEVSRC-----FMRDPVSILVKK--EELT 239

  Fly   503 ISQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRTIVFCNSIDCVKRLATLFGL 567
            :...|...:...|:..:..|    ||.:    |......|     :::|||:...|.:|.....:
  Fly   240 LEGIKQFYVNVKQENWKLGT----LCDL----YDTLSITQ-----SVIFCNTRRKVDQLTQEMSI 291

  Fly   568 LDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHR 632
            .:.....:|.:|.|:.|...:::||...:.:||.||:.|||:|:..|..||:|.:|...|||:||
  Fly   292 HNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHR 356

  Fly   633 SGRTARANKHGITVMFMEPGE---VKSYVKLYKTLERTEDLP 671
            .||..|..:.|:.:.|:...:   :|...:.|.|  ..|::|
  Fly   357 IGRGGRFGRKGVAINFITDDDRRILKDIEQFYHT--TIEEMP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 BLVR <125..191 CDD:283923 3/12 (25%)
SrmB 201..747 CDD:223587 120/474 (25%)
P-loop_NTPase 217..465 CDD:304359 61/247 (25%)
HELICc 531..648 CDD:238034 35/116 (30%)
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 122/493 (25%)
DEADc 32..232 CDD:238167 65/275 (24%)
Helicase_C 254..358 CDD:278689 34/116 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451547
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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