DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9143 and Hel25E

DIOPT Version :9

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster


Alignment Length:483 Identity:129/483 - (26%)
Similarity:217/483 - (44%) Gaps:109/483 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DEEEVVKAEDSADQQEST---DEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQ 240
            |.::::..||. :|.|:|   ::|||:.....|..:...|.:....:...||||:.:.||:.|::
  Fly     3 DNDDLLDYEDE-EQTETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSE 66

  Fly   241 IQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAA 305
            :|...:|.|:.| .|||..|::|.|||..|.:..|                       ||.||  
  Fly    67 VQHECIPQAVLG-MDILCQAKSGMGKTAVFVLATL-----------------------QQLEP-- 105

  Fly   306 DEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKY-TGI 369
                              ||..:            .:.||:..|||||.|:.......:|| ..:
  Fly   106 ------------------SDNNT------------CHVLVMCHTRELAFQISKEYERFSKYMPTV 140

  Fly   370 RVAAIFGGLAVAKQERVLRQ-CPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKG 433
            :||..|||:|:.|.|..|:. .|.|||.||||:..|..  |:.| .::.:...|:||.|:|:|: 
  Fly   141 KVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIR--NKKL-NLKLLKHFVLDECDKMLEQ- 201

  Fly   434 HFEELRSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQT----VDQKI 494
             .:..|.:.::..|   ..|.:|..::||||:  .|:      |.|.|  ||::..    ||.:.
  Fly   202 -LDMRRDVQEIFRS---TPHGKQVMMFSATLS--KDI------RPVCK--KFMQDPMEVYVDDEA 252

  Fly   495 ESLIEELGISQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRTIVFCNSIDCVK 559
            :..:..|   |...|::..:::      ..:|...:|..:::          :.::|..|   |:
  Fly   253 KLTLHGL---QQHYVNLKENEK------NKKLFELLDVLEFN----------QVVIFVKS---VQ 295

  Fly   560 RLATLFGLLDCNPLP---LHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQ 621
            |...|..||.....|   :|..|.|::||...::|:|....:|:||::..||:||..|..|.:|.
  Fly   296 RCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD 360

  Fly   622 VPRTSENYVHRSGRTARANKHGITVMFM 649
            :|..|:.|:||..|..|....|:.:.|:
  Fly   361 MPEDSDTYLHRVARAGRFGTKGLAITFV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 BLVR <125..191 CDD:283923 3/11 (27%)
SrmB 201..747 CDD:223587 121/458 (26%)
P-loop_NTPase 217..465 CDD:304359 70/249 (28%)
HELICc 531..648 CDD:238034 34/119 (29%)
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 78/281 (28%)
SF2_C_DEAD 259..388 CDD:350174 38/150 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451345
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.