DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9143 and Dbp80

DIOPT Version :9

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:636 Identity:139/636 - (21%)
Similarity:244/636 - (38%) Gaps:200/636 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KRKELRKQKKSKGKEN--DNSEESSDEHAADRFALLRPPPSDDE-------EEVVKAEDSADQQE 194
            |:.|.::..|...|.|  ..|.|.:|...||        |::..       :.:|..:.|.|.|:
  Fly     6 KKAEDQEVSKLVDKLNLDSKSGEETDFDVAD--------PAETSLLIKILGKGLVNTKLSLDIQQ 62

  Fly   195 STDEEAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAI-HGKKDILG 258
            . :..:| |..:.|.||        |.:.||:|:.:...||.||::||...||..: ...::::.
  Fly    63 K-NPNSP-LHSVKTFEA--------LHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIA 117

  Fly   259 AAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGA 323
            .:::|:|||.||.:.||:.:      |:   ....|:|                           
  Fly   118 QSQSGTGKTAAFVLAMLSRV------NV---CLNHPQV--------------------------- 146

  Fly   324 SDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFG------------ 376
                                |.|:||.|||:|           || .|||..|            
  Fly   147 --------------------LCLSPTYELAIQ-----------TG-EVAARMGQFCREIKLRFAV 179

  Fly   377 -GLAVAKQERVLRQCPDIVVATPGRL--WELYAQGNRHLGKIEDVSFLVIDETDRMV-EKGHFEE 437
             |..|.:.:::...   |::.|||:|  |.:    ...|..::.:|..|:||.|.|: .:||.::
  Fly   180 RGEEVDRSKKIEEH---ILIGTPGKLLDWGI----KFRLFDMKKISVFVLDEADVMIATQGHHDQ 237

  Fly   438 LRSLLKVLNSDEQKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELG 502
            ...:.|:||     .|.:..| :|||                     :.|:.:|      ...|.
  Fly   238 CIRIHKMLN-----PHCQMLF-FSAT---------------------YGKEVMD------FARLI 269

  Fly   503 ISQPKIVDITSSQQTAQTLTESRLLCPIDHKDY----HLYYFIQRHPGRTIVFCNSIDCVKRLAT 563
            ::.|.|:.:...:::.:.:.:..:.|..:...|    ::|..|.  .|:.|:||::......||.
  Fly   270 VADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCIS--VGQAIIFCHTKRTAAWLAA 332

  Fly   564 LFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVP----- 623
            .......:...|..::...|||..|:|||.....:||.|::.:||:||..|..|:::.:|     
  Fly   333 KMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDG 397

  Fly   624 -RTSENYVHRSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTEDLPLFPILERFMGAVRERV 687
             ...|.|:||.|||.|          .||..:            |.:.|:|       |...|..
  Fly   398 MADCETYLHRIGRTGR----------FEPSAL------------TRNSPIF-------GVKAESG 433

  Fly   688 NLARDLDKEELKLKRVQSERGWMKKHAEEMDMI----IDGYNDESGSDQDE 734
            .:.:::::..   ...:|....|.|..|.:.::    :.|..||:...|.|
  Fly   434 KIGKEINRSS---SGAESGSREMPKEKENISLLKFFSLTGNLDEAWDVQSE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 BLVR <125..191 CDD:283923 13/60 (22%)
SrmB 201..747 CDD:223587 124/565 (22%)
P-loop_NTPase 217..465 CDD:304359 62/264 (23%)
HELICc 531..648 CDD:238034 35/126 (28%)
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 69/317 (22%)
DEXDc 88..291 CDD:214692 63/310 (20%)
Helicase_C 299..414 CDD:278689 35/126 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451504
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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