DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9143 and F55F8.2

DIOPT Version :10

Sequence 1:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_491652.1 Gene:F55F8.2 / 172223 WormBaseID:WBGene00018890 Length:746 Species:Caenorhabditis elegans


Alignment Length:800 Identity:274/800 - (34%)
Similarity:423/800 - (52%) Gaps:119/800 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NWQKVKIKGHVISDDGGGFEGLIGLEVLKDYDASLVKSSQKRTTSRNPDRERKLKKKKRKVSKGD 93
            |||...::..     .|.|:..: |:.|..::..|.:..:..|        :|..|||.|..|.:
 Worm     9 NWQTCDVEAM-----DGDFDDNM-LQFLGSFEEVLPEGVEVET--------KKGMKKKNKPKKVE 59

  Fly    94 EEESSESSSESESEDEVAVAARTSKKARLAERHAQKMQKLREKREKRKELRKQKKSKGKENDNSE 158
            ..|..|..::...|      .|.:||.|..|:.|...::.:|:..|||:  |:.:|..|:::|:.
 Worm    60 NTERPEEDAKCVEE------RRLAKKLRRKEQMAANRKQKKERLAKRKQ--KEAESSAKKSENAT 116

  Fly   159 ESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTDEEAPELVPISTGEAEDMSAWNGL-GV 222
            |::.|         :|          |.:......|:.|...|:.......:..|:|||... .:
 Worm   117 ETTTE---------KP----------KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFL 162

  Fly   223 PASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIR 287
            |..:|.|:.:.||..||:||:..||||:..::|:|||||||||||||||||::|.::|       
 Worm   163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLE------- 220

  Fly   288 SGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPLYGLVLTPTREL 352
                                               :||:..:.|  :..|:.| ..|::.|||||
 Worm   221 -----------------------------------SSDDSQETE--STEVRGP-RALIVAPTREL 247

  Fly   353 AVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVL-RQCPDIVVATPGRLWELY--AQGNRHLGK 414
            .:|:..|:.|....|.:...:|.||||..||||:: :|.||||||||||||.:.  |:....|.:
 Worm   248 VIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAE 312

  Fly   415 IEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLTL--VHDLPDHMQKR 477
            .:|:..||:||||||||:|:|.||..:|..:: :|.:|.:.|..|:|||||.  ..|:.:..:| 
 Worm   313 WKDLKCLVVDETDRMVEEGYFAELTHILNKIH-EESEKEKLQTLVFSATLTFAKAQDVAEEEKK- 375

  Fly   478 NVGKRPKFVKQTVDQKIESLIEELGI--SQPKIVDITSSQQTAQTLTESRLLC-PIDHKDYHLYY 539
                  |..:.:..|||:.||:..|:  ::.|::|:|....||..|.|:|:.| .:..||..|.|
 Worm   376 ------KAKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARINCGNLLEKDTSLVY 434

  Fly   540 FIQRHPGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDV 604
            .:.|:|||||||.||||..:||.::...::.:|:.|||.|||||||||||:|.:|...:|:||||
 Worm   435 LLTRYPGRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDV 499

  Fly   605 AARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTED 669
            |||||||..::||||||||:..|.|:|||||||||:..|:||:.::|...:.|:||.|.|.|.:|
 Worm   500 AARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSRQFYMKLCKGLNRMQD 564

  Fly   670 LPLFPI-LERFMGAVRERVNLARDLDKEELKLKRVQSERGWMKKHAEEMDMIID--GYNDESGSD 731
            |.:||| .|..|.|:::||.||.::|....:.|:::....|.:|.|...|:..|  .:.:..|.:
 Worm   565 LNVFPIDFEPLMNAIKKRVRLASEIDSLGFRCKKIKMSESWFEKAARAADLDYDETRHREMDGLN 629

  Fly   732 QDEDPFVIERRRNRLRVETVRAQLNALLAQPIFPR-----GFSFKYPNSEAAQLATSHTQSAVET 791
            .:.|..|.:.|:       ::|||...|:.|: ||     ....||...|......|...:|::.
 Worm   630 LEVDTMVQKSRQ-------LQAQLRTELSLPL-PRVDGSDSMKTKYITPEIVARLRSVGDNAIDV 686

  Fly   792 MKAAIEDQKQAKKDRNKRKR 811
            :...|::.|:.|:...|..|
 Worm   687 LNQKIDETKEWKRKSRKATR 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 106/290 (37%)
SF2_C_DEAD 521..648 CDD:350174 73/127 (57%)
F55F8.2NP_491652.1 PTZ00121 <59..>129 CDD:173412 21/96 (22%)
DEADc_DDX24 166..404 CDD:350704 106/290 (37%)
SF2_C_DEAD 420..544 CDD:350174 70/123 (57%)

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