DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11788 and Dscc1

DIOPT Version :10

Sequence 1:NP_611466.2 Gene:CG11788 / 37295 FlyBaseID:FBgn0034495 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001342523.1 Gene:Dscc1 / 72107 MGIID:1919357 Length:462 Species:Mus musculus


Alignment Length:481 Identity:126/481 - (26%)
Similarity:207/481 - (43%) Gaps:103/481 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RTPEDVKAIVKHAKLDERQLTQLTQALYFPS--ADVDSDNLRLLELDGHMLGQIRDGQTLYFKGG 78
            ||.|:|.|.::.|||:..:|......|.|.|  ....:.:..||||:..:..|:..|.:...:|.
Mouse     9 RTREEVDATLQVAKLNATELLPTVHCLSFSSGTGGAATGDFCLLELEPALCQQLEAGDSFVIRGD 73

  Fly    79 QNEKLVLCTDERTYDVKGAEISNSLLLVPDLKFAAATSTSPLKSPRTGNANASLERSLNDSTEDE 143
            ::|:.|||:.::|||:|.|:.||.||.:|..|                             |.|:
Mouse    74 KDEQAVLCSKDKTYDLKIADTSNMLLFIPGCK-----------------------------TPDQ 109

  Fly   144 L---EVPRTLEQRPVLKVFHEYFECREIKPRFRKLGELLQLTRYSGPENEFCVEQ---KLLFTFS 202
            |   |.|..:....:....:.|:|.|..:|:.:||..||....|.||:::  .|:   :..:|..
Mouse   110 LKEEETPSAIVHTEIFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQ--KEEDASRSKYTTE 172

  Fly   203 QLLDTVQCSRGQFMEGLNQYRAIELDGRMRVMEYEYEYRIINMMLGLISENSWALDEVEREETIN 267
            .||:.:|.|..:.|..|....|.|:.|..|::|::||.:::|.:..|:...||:||.|.....:.
Mouse   173 DLLNHIQASEEEIMAQLQVLNACEIGGYWRILEFDYEIKLLNHVTQLVDSESWSLDRVPLTVCLQ 237

  Fly   268 ALKGIAPE-----------------------DV----------------VAGLFDIYTIPSER-- 291
            .|..:.||                       |:                ||...:|..|..||  
Mouse   238 ELGPLEPELFACMYACAQAACTGQKRASALLDLELTEGSEAPGGCSSCSVAPGGEIENIQLERIR 302

  Fly   292 --------------CPGK---------FEYQESLVSRIVAQNILQPGLRFRNEEFMRTWQEVLPE 333
                          |.||         ||.....:.|:.|:.:||..::|...||...||:.:||
Mouse   303 DFGSLREMIEHCLKCYGKRYVDKDDVYFELDADKICRVTAEMLLQNAVKFNLAEFQEVWQQSVPE 367

  Fly   334 GMSCDLKYLRGLGICDKEGAQPCIRSLAEELLPTNISDRMRALFKTKKRWTMEEMEPYIECFTTP 398
            ||:..|..|:||.:.|:......|..|..:.||....||..:||..:::||.|::.|||:.....
Mouse   368 GMTTRLDQLKGLALVDRNSRPEIIFLLKVDDLPEGTQDRFNSLFSLREKWTEEDITPYIQDLCGE 432

  Fly   399 NLSVSTLLAKHARSLTDGGVRYFVSK 424
            ..::..||.|::||....|::.:.|:
Mouse   433 KQTIGALLTKYSRSSMQNGIKVYNSR 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11788NP_611466.2 Dcc1 54..392 CDD:462857 105/407 (26%)
Dscc1NP_001342523.1 Dcc1 49..426 CDD:462857 105/407 (26%)

Return to query results.
Submit another query.