DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11788 and Dscc1

DIOPT Version :10

Sequence 1:NP_611466.2 Gene:CG11788 / 37295 FlyBaseID:FBgn0034495 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001292165.1 Gene:Dscc1 / 299933 RGDID:1561749 Length:399 Species:Rattus norvegicus


Alignment Length:426 Identity:118/426 - (27%)
Similarity:203/426 - (47%) Gaps:56/426 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RTPEDVKAIVKHAKLDERQLTQLTQALYFPS--ADVDSDNLRLLELDGHMLGQIRDGQTLYFKGG 78
            ||.|:|.|.::.|||:..:|......|.|.|  :...:.:..||||:..:..|:..|.:...:|.
  Rat     9 RTREEVDATLQVAKLNAAELLPTVHCLSFGSGTSGAATGDFCLLELEPALCQQLEAGDSFVIRGD 73

  Fly    79 QNEKLVLCTDERTYDVKGAEISNSLLLVPDLKFAAATSTSPLKSPRTGNANASLERSLNDSTEDE 143
            ::|:.|||:.::|||:|.|:.||.||.:|..|                             |.|:
  Rat    74 KDEQAVLCSKDKTYDLKIADTSNMLLFIPGCK-----------------------------TPDQ 109

  Fly   144 LEVPRTLEQRPVLKVF---HEYFECREIKPRFRKLGELLQLTRYSGPENEFCVEQ---KLLFTFS 202
            |:...|.......::|   :.|:|.|..:|:.:||.:||....|.||:::  .|:   :..:|..
  Rat   110 LKGEETQSNIVHTEIFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSQ--KEEDPSRSKYTTE 172

  Fly   203 QLLDTVQCSRGQFMEGLNQYRAIELDGRMRVMEYEYEYRIINMMLGLISENSWALDEVEREETIN 267
            .||:.:|.|..:.|..|....|.|:.|..|::|::||.:::|.:..|:...||:.::|.....:.
  Rat   173 DLLNQIQASEEEIMAQLQVLNACEIGGYWRILEFDYEIKLLNHVTQLVDSESWSFNKVPLNVCLQ 237

  Fly   268 ALKGIAPEDVVAGLFDIYTIPSERCPGK---------FEYQESLVSRIVAQNILQPGLRFRNEEF 323
            .|..:.||:::....        :|.||         ||.....|.|..|:.:||..::|...||
  Rat   238 ELGPLEPEEMIEHCL--------KCYGKKYVDKGEVYFELNADKVCRATAEMLLQNAVKFNLAEF 294

  Fly   324 MRTWQEVLPEGMSCDLKYLRGLGICDKEGAQPCIRSLAEELLPTNISDRMRALFKTKKRWTMEEM 388
            ...||:.:||||:..|..|:||.:.|:......|.....:.||....||..:||..:::||.|::
  Rat   295 QEVWQQSVPEGMTTRLDQLKGLALVDRSSRPEIIFLFKVDALPEGTQDRFNSLFSLREKWTEEDI 359

  Fly   389 EPYIECFTTPNLSVSTLLAKHARSLTDGGVRYFVSK 424
            .|||:.......::..||.|::||....||:.:.|:
  Rat   360 APYIQDLCGEKQTIGALLTKYSRSSMQNGVKVYNSR 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11788NP_611466.2 Dcc1 54..392 CDD:462857 96/352 (27%)
Dscc1NP_001292165.1 Dcc1 49..363 CDD:462857 96/352 (27%)

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