DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11788 and dcc1

DIOPT Version :10

Sequence 1:NP_611466.2 Gene:CG11788 / 37295 FlyBaseID:FBgn0034495 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_592927.2 Gene:dcc1 / 2543078 PomBaseID:SPAC31A2.15C Length:357 Species:Schizosaccharomyces pombe


Alignment Length:398 Identity:93/398 - (23%)
Similarity:161/398 - (40%) Gaps:91/398 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PSADVDSDNLRLLELDGHMLGQIRDG--QTLYFKGGQNEKL-VLCTDERTYDVKGAEISNSLLLV 106
            ||:|:.|:.| |||||..:|..:.:.  :.:.||...::|. ||||.::||.|:....|||.||.
pombe    16 PSSDISSEYL-LLELDDDLLKTLEENPEEEIVFKSDFDKKASVLCTSDKTYAVRQVVQSNSYLLF 79

  Fly   107 PDLKFAAATSTSPLKSPRTGNANASLERSLNDSTEDELEVPR-----------------TLEQRP 154
            .:|            ||        .:..|||:....|||.|                 ::|.:|
pombe    80 DEL------------SP--------TDWVLNDTCYSFLEVERIYGFIFSDDKISYWDEDSVELKP 124

  Fly   155 VLKVFHEYFECREIKPRFRKLGELLQLTRYSGPENEFCVEQKLLFTFSQLLDTVQCSRGQFMEGL 219
            :.....::.  |.:.....::...||       :|.|.|:.:.|:   :|..:..||...::..:
pombe   125 ISLTKDQFI--RSVPASRNEVDSFLQ-------KNFFMVKNEFLY---RLSPSYICSIIDWIFVI 177

  Fly   220 NQYRAIELDGRMRVMEYEYEYRIINMMLGLISENSWAL-DEVEREETINALKGIAPEDVVAGLFD 283
            .|...|:.        ..:|::|:...         |: ||.:.:..|..|:.|:.         
pombe   178 AQQLHIDF--------ASFEFKILKKP---------AMDDEFDWDSVICVLESISS--------- 216

  Fly   284 IYTIPSERCPGKFEYQESLVSRIVAQNILQPGLRFRNEEFMRTWQEVLP---EGMSCDLKYLRGL 345
              .|.....|.||.....|.:....:.:|:......::||::.|...||   :|:. .|..|:|.
pombe   217 --PIKDNVLPKKFNIDLELTTFWYGRFLLEGINSISSDEFIQLWDNRLPYPCKGLP-SLNLLKGY 278

  Fly   346 GICDKEGAQPCIRSLAEELLPTNISDRMRALFKTKKRWTMEEMEPYIECFTTPNLSVSTLLAKHA 410
            ...|....   |:.|:.:.||...|.|.::||:.|.:|..||:..:::........|..|:.|:.
pombe   279 YFHDTPNT---IQYLSGDQLPREPSRRFQSLFQLKSKWLYEELWSFVKDLALSKSRVEALILKYG 340

  Fly   411 RSLT--DG 416
            |..|  ||
pombe   341 RKQTSRDG 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11788NP_611466.2 Dcc1 54..392 CDD:462857 82/361 (23%)
dcc1NP_592927.2 Dcc1 42..322 CDD:462857 75/343 (22%)

Return to query results.
Submit another query.