DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10444 and cho-1

DIOPT Version :9

Sequence 1:NP_611465.2 Gene:CG10444 / 37294 FlyBaseID:FBgn0034494 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_502539.1 Gene:cho-1 / 178274 WormBaseID:WBGene00000501 Length:576 Species:Caenorhabditis elegans


Alignment Length:504 Identity:106/504 - (21%)
Similarity:195/504 - (38%) Gaps:126/504 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAVLITILVISALIGIYYRYTGGKQKT-----------TQEYLMADQSMTTFPVSFSLMASFMSA 64
            |.|...:|::  ::||   :.|.|.|:           |:|.::|.:::.|....|::.|:::..
 Worm     9 AIVFFYVLIL--VVGI---WAGRKSKSSKELESEAGAATEEVMLAGRNIGTLVGIFTMTATWVGG 68

  Fly    65 ISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASL 129
            ..:.|.:...|..|.:.|...:.|.:|..:....|..........::.:..:.::||.       
 Worm    69 AYINGTAEALYNGGLLGCQAPVGYAISLVMGGLLFAKKMREEGYITMLDPFQHKYGQR------- 126

  Fly   130 AFTVQMVLYMGIALYAPAL----------------ALEAVTGIHRSMAIVVIGLVCTFYSTLGGL 178
                     :|..:|.|||                .|..:.||..:.::.:...:..||:..||.
 Worm   127 ---------IGGLMYVPALLGETFWTAAILSALGATLSVILGIDMNASVTLSACIAVFYTFTGGY 182

  Fly   179 KAVLITDVFQSFLMFAAIYAVIAVSAIKAGG-----FAAIWDVAVERGRV-NFIEFSLDPTVRHT 237
            .||..|||.|.|.:|..::..:..:.:..|.     .|..|     .|.: .|.|.||       
 Worm   183 YAVAYTDVVQLFCIFVGLWVCVPAAMVHDGAKDISRNAGDW-----IGEIGGFKETSL------- 235

  Fly   238 WW-----SLIIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQS--------ALWWNLP--ILGMLS 287
             |     .|:.||:..        |...||:||.:....||:        .:...:|  ::|.::
 Worm   236 -WIDCMLLLVFGGIPW--------QVYFQRVLSSKTAHGAQTLSFVAGVGCILMAIPPALIGAIA 291

  Fly   288 FSTIFSGLSIFYYYRDCDPLLKGR------IDKRDQIMPLFALETMGQYPGLCGLFVSGIFSASL 346
            .:|       .:...|..|...|.      .|||:.::||.......::....||  ..:.:|.:
 Worm   292 RNT-------DWRMTDYSPWNNGTKVESIPPDKRNMVVPLVFQYLTPRWVAFIGL--GAVSAAVM 347

  Fly   347 STISSAVTSLSAVTLEDYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIG-----LAFVAGS 406
            |:..|:|.|.:::...:        |:|.|:....|.....||..| .::|:|     :|....|
 Worm   348 SSADSSVLSAASMFAHN--------IWKLTIRPHASEKEVIIVMRI-AIICVGIMATIMALTIQS 403

  Fly   407 MGGV--LQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVSLIV 453
            :.|:  |.|.| ::.::...||.:    |...|||..|.|.|:.|.|::
 Worm   404 IYGLWYLCADL-VYVILFPQLLCV----VYMPRSNTYGSLAGYAVGLVL 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10444NP_611465.2 SLC5sbd_NIS-SMVT 9..531 CDD:271383 106/504 (21%)
cho-1NP_502539.1 SLC5sbd_CHT 7..492 CDD:271368 106/504 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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