DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8908 and ABCA12

DIOPT Version :10

Sequence 1:NP_611464.3 Gene:CG8908 / 37293 FlyBaseID:FBgn0034493 Length:1626 Species:Drosophila melanogaster
Sequence 2:XP_011509253.1 Gene:ABCA12 / 26154 HGNCID:14637 Length:2598 Species:Homo sapiens


Alignment Length:431 Identity:90/431 - (20%)
Similarity:143/431 - (33%) Gaps:182/431 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   542 SIFAPATTNAGNLILYELDPEEIANTATDGPDELDPVHQLKAAFIYHIKRNTVAADGLIASMLEL 606
            |:..|.|.|:          |:||...:    |||.|           :.||.....::..|  :
Human   159 SVTGPITANS----------EQIARLRS----ELDVV-----------RGNTKVMSEMLTEM--V 196

  Fly   607 PGQRELVD----GELDRT-------VLKIAIDLAQDTPAADPRWEVTDKHALGSSTSMQIIQQLR 660
            |||.:..|    .||:||       ::::...::.:        |||::       .:.:...|.
Human   197 PGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNE--------EVTEE-------LLHVNDDLN 246

  Fly   661 EKNVAYTQFIEFLHSRKLWDR----LNAVTS----GAGAGTEA------GNARPTS-----LCLA 706
            ...:.|.:|..:...|.:.:.    ||.||.    ..|.|:.|      ||..|.|     |...
Human   247 NVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAGL 311

  Fly   707 DIG-EKIVATIGIKCLHNSHSRIIDEAINLVLRQSNRTVPFPNLTPQDLF--YAQT--NRVEELF 766
            |:| |.:..|:.                  .|:|.|         |:|.|  :|||  |.:.|..
Human   312 DLGTESVSGTLS------------------SLQQCN---------PRDGFDMFAQTRGNSLAEQR 349

  Fly   767 KVLS----ELVDGYVQQELTALQIQSALVEVNTIVLTVLQEVVKYRESKAGTFTVREELQKRYEQ 827
            |.::    :.|.|          :.|||              ...::|..|||.  ...|||   
Human   350 KTVTYEDPQAVGG----------LASAL--------------DNRKQSSEGTFL--SSAQKR--- 385

  Fly   828 IPWTAMPGKHGLRDVLLQLISCTLRHGVKGTAEPEFRMKHFKHLTELIDYVLDGRKTYL------ 886
                   |:.|..| |..:.|..:..|:...|:|.               |:|..:.:|      
Human   386 -------GRGGESD-LEPIDSWLITQGMIPVAQPS---------------VMDDIEVWLRTDLKG 427

  Fly   887 ----ESVHDEEKYAVLLQQYESQRS-------DLIYPLVEA 916
                |.|..||     ..::..:|:       ||..|.:||
Human   428 DDLEEGVTSEE-----FDKFLEERAKAAEMVPDLPSPPMEA 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8908NP_611464.3 rim_protein <124..1626 CDD:130324 90/431 (21%)
ABCA12XP_011509253.1 rim_protein 7..>86 CDD:130324
rim_protein 752..2579 CDD:130324
Blue background indicates that the domain is not in the aligned region.

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