DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8908 and abca5

DIOPT Version :10

Sequence 1:NP_611464.3 Gene:CG8908 / 37293 FlyBaseID:FBgn0034493 Length:1626 Species:Drosophila melanogaster
Sequence 2:NP_001135599.1 Gene:abca5 / 100216156 XenbaseID:XB-GENE-1012902 Length:1639 Species:Xenopus tropicalis


Alignment Length:1812 Identity:407/1812 - (22%)
Similarity:738/1812 - (40%) Gaps:402/1812 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KTQSSICLLWLVICKTARFQFSNTLTSVIIIVGPIVVFLVYAATALFREPQEETSVKYPPVNIT- 72
            :|::.:...:|:.|:|.|       .|:..|:.||:.:|:    :|......|.|..|..:..| 
 Frog    13 QTKTLLYKNYLIKCRTKR-------DSIQEILYPIIWWLI----SLLWASMVEQSKHYEAMPNTL 66

  Fly    73 --------TKVPYIYYSPENLVLAAVIEDVVHD--LKAVGSKAFASASELNKALIGKDTYGYVGI 127
                    ::...|.|:||:.:...::.....:  |..:..|.:.....:..|....:.: :||:
 Frog    67 LGGLDGPSSRHLIIGYTPESNITQHIMAMTASECYLTDITFKPYLDEEHMKTASSSFEEH-FVGV 130

  Fly   128 EFDDSFSDINELPINVTVGLRFPLH------LRKNPK---MVWDNTSILKHSKMDVDYYQVEGFL 183
            .||::.|          ..|||.::      |...|:   .:|:         .:...|....|.
 Frog   131 VFDNAMS----------YKLRFSVYSVPDSTLYMTPREDCHLWN---------CEASEYFYSTFT 176

  Fly   184 VVQAKLSEALIRAKN-----EAVVLPEVILQHYPDVAEVDRLDNRVALGGVL----FLPVTISAA 239
            .:||.:..::|:.|.     |.:.....::....:|..||...:  ||..|.    |.|:..|.|
 Frog   177 YLQACIDSSMIKMKTNYSAWEELKSTRAVIMGEQEVIVVDTFYH--ALMSVFLVMAFSPLGYSVA 239

  Fly   240 YLAQMIVMERRDHLRDMLELMGVRAWIYWLSWFLV--AFLLLSIPTVFMVLLLKWRYFSLSDSSL 302
            :   .:|.|:...:::.::|||:....:||.|.|:  .|:|: |..|..|:..  .:|..|.|:.
 Frog   240 F---YVVFEKEKKVKEFMKLMGLHDTAFWLPWVLLYTGFILV-ISLVMAVVAT--TFFPFSKSNC 298

  Fly   303 VLFFLL--VYNLEVLTSAFMISSFFSDTVGVQVAIVIVHLIGCLPWRLLLMGYV-------PTLP 358
            .|.|||  :|.:.::..|.|::..|.::   :.|..||.|      ..|.:|.|       ...|
 Frog   299 FLIFLLYALYGISLVLFALMLAPLFKNS---KRAGAIVFL------STLALGAVGIFIVLKEDFP 354

  Fly   359 RTI--FVCLFLNSSLAMGLQQFIKSENLRLGLHWTYLFERTDWDEFVHLGP-----ILLFMLFGC 416
            ::.  |...|...:..:|:.|.:..|:.:.|..:|:|.:          ||     ..:|::...
 Frog   355 KSFVWFFSPFCQCTFMIGIAQVLHLEDFQRGAQFTHLKD----------GPYPLVITFIFLVVDS 409

  Fly   417 LLRILVLAYMEQL--RSYQNRKW-YFPVQPSFWCRWNRR---------PRSDDF---------DV 460
            ::.:|:..|::|:  ..|..|:. :|.::||:|.:..:|         .|:.|.         ::
 Frog   410 VMYLLLATYLDQVLPGEYGLRQSPFFFLKPSYWSKRKKRYGELNESYFDRAVDMSEVIEPVSAEL 474

  Fly   461 EGQETGIRGHPLIVRARNIEKVFNEWIAVKDLNLNFYQDEITVFLGHNDSGKSTILMLLAGFLRP 525
            .|:| .||...:....|...|..|   |::.|..:.|:.:||..:||:.:||:|::.:|.|...|
 Frog   475 HGKE-AIRICCICKSFRKNNKPRN---ALQGLTFDIYEGQITALVGHSGTGKTTLMNILCGLCPP 535

  Fly   526 SAGEITINGY---DLATNQRKARQSMCICPQPNVLFEKVNARWHLQFYCRLKGLNRQEASAETDK 587
            :.|..|:.|:   |:...| :|.:...||.|.::.|:.:....:|..:..|:|::.:....|.:|
 Frog   536 TEGFATVYGHRVTDIDEIQ-EASKMTGICQQTDIFFDVLTVEENLHIFASLRGIDEKTKEQEINK 599

  Fly   588 YLEIGRLQDFANTKVKNLPSGIKRMLMLCCNLCGNSKILLLDEPGTSMDPAMRSNMWDLLRRERK 652
            .|....:|...:...:.|..|.||.|.:...:.||.|:||||||...||...|..:||||:: ||
 Frog   600 ILFDLDMQALKHNHARTLSIGQKRKLSVAIAVLGNPKVLLLDEPTAGMDSCSRHTVWDLLKK-RK 663

  Fly   653 GRCI-IMATHNMNEAEVVADQIVVLCDAQVIGYGTTGFLTQIAGTGSSYLLICTKMDTCIVAEVT 716
            |:.: :.:||.|.||:::||:..|:....:...|::.||....|.|  |.|.......|.|..::
 Frog   664 GKHVTVFSTHCMEEADILADRKAVISQGSLKCIGSSLFLKSKWGVG--YRLSMDIKKPCDVDALS 726

  Fly   717 NFLQIRFPDIKLHNEFSIYVTYELPTKYVQQYAALFLELEEALGELNLAEISVCAPTLGSVFLQM 781
            :.:........|..:....:.|.||.|.|.::..||..|:.. .:|.:....|.|.||..||.::
 Frog   727 SLITQHISGASLMQQSENSLLYSLPLKDVSKFPGLFSALDSG-SDLGIITYGVSATTLEDVFFKL 790

  Fly   782 GEEMRQSWNRISSFDLLSSPSPMLSLLNLLPTFEVREDDGRVKCCNQ------------------ 828
            ..|..           :.....:.:..||       ||:|:.|....                  
 Frog   791 ETEAE-----------IDQTDGIFNQRNL-------EDEGKWKSMEDIEQGLLELSLESSPCSVT 837

  Fly   829 ----WR---AIVEKKRLFTLRHQ--KFYCMIIATPIIICL---LIISFSIFIFLVDHHLSEL--- 878
                |:   |.|.|.....|..:  .|.|      :.:||   |:...:::...:.:|.|..   
 Frog   838 GSALWKQQVAAVAKLHFRNLHRESKSFRC------VCLCLLFFLVPQLTLYFLGLSYHQSLAPIR 896

  Fly   879 LVTDLSI-YPKAVFVIDSPAEGNRFERHYMANVIGQGGTVRSTSGTPIDDYLLAEMESDQVKVQ- 941
            |..|:.. :||            :....::.:::.|..|     ||.:|: ||..:.|.::||. 
 Frog   897 LSADMYFSHPK------------QKSHKFLTSLLLQNST-----GTNLDE-LLGNLNSQKIKVDL 943

  Fly   942 ----------------HTFLAGA--TFDSNANSIIAWSNNKLKHGSALSMGLVYAAIGQEL-AKL 987
                            :.||:|.  |::       |..|:.:.|...:.:..:..::.::| ...
 Frog   944 INGSDYMSASPHNAALNVFLSGKHYTYE-------AIFNSSMVHSLPVLINTISNSLLRQLGVNE 1001

  Fly   988 DIRIVNKP-YQDTVQQAVRGLIYASTIEFAVLVFHYLVLGTAIF-AVLPIVERRSKVQH------ 1044
            .|.:.|.| |||.:..:     |.       |.|::|:....|. .:||.:...:...|      
 Frog  1002 SIEVWNSPFYQDFLHTS-----YG-------LDFYFLIAYLGIMTGMLPYIAMENAYNHKVKAYS 1054

  Fly  1045 QQFSSGMSRSTYWLSHLSWDYCFYIAMIL-----PLIVVAGITI--GSVLPVI---------VQL 1093
            |...:|:..|.||:.....|...:..|:|     .|...:||.:  |:||.:|         |.|
 Frog  1055 QLKMAGLYPSAYWVGQAVVDIPLFFLMLLFMVGSMLAFKSGIDLHAGTVLAMIFCLIGYVPAVVL 1119

  Fly  1094 LAFGFSAISFTYLLCLMSNDFGKMFSIILYIN-MIGVL----ALFIHPKSPQTRYAVIESVLLVH 1153
            |.:   .:||||.|.   ||..:.:|:|..:. .|.::    |:|.......||..|..|:..  
 Frog  1120 LTY---VVSFTYKLI---NDTRQWWSLIFAVTASISIIIIEAAIFFASSVTVTRLHVFFSIFF-- 1176

  Fly  1154 PHYSLCCGMYEAIRMS-------TFSLKQLPYLIFS-GAAYLTIVVFAWVPR--RLNYVFKSIRN 1208
            |.|.|...:...|:||       ...|.||..|:.: .|.|:..::|..:.|  .:.|..:|||.
 Frog  1177 PVYPLLGCLTCFIKMSRNLAHSDVKGLTQLGRLLVAVFAPYVHFLIFFLILRYLEMKYGGRSIRK 1241

  Fly  1209 EKIYPSY-------------KDEDKEVDKMRRRLAYLTTAHYAFFPLIL-KNLSK---RYGSFV- 1255
            :.::.|.             :|||::|...|.|:...........|::| ..|.|   :.|..: 
 Frog  1242 DPVFRSQTKKTKPWKFAEVPEDEDEDVKVERARVGEYMAPDCNEKPMVLVSGLHKEQDQTGKTIL 1306

  Fly  1256 --AVRSLTLDLNPF-----ECVGLLGRNGSGKSSIFRMIVGMESITVGSIHIKGYSLKTRP-KDA 1312
              |:|.|.::...|     |.|||:|.||:|||::..|:||...:..|.| :.|......| ...
 Frog  1307 GKAMRKLVVNNVSFCVRKGETVGLVGPNGAGKSTLLNMMVGQSELNAGQI-LMGDPAAGEPGLSP 1370

  Fly  1313 SRHVGFCPRELMLLSFMTGKDALRFCCLINGIRREYIKSLVASLAECFELVPHMNKRISTYSNGT 1377
            .|.:|:.|:.......:..::.|.....|.|:....:|.:...:.|..:|..|:.:.....|.|.
 Frog  1371 PRFLGYSPQTNYFWPEIKLQEHLETYGAIKGMGSNVLKEVTRRIVETLDLKDHLQEPAKKLSVGN 1435

  Fly  1378 KRKLMIAMGTLA-PSLMCLDEPTAGVDMHAKYEIWSILDGIRQG-GRSILLTTHNLEECEFLCTN 1440
            :|||..|:..|. |.::.|:||:.|:|...|..:|.::....:| .::.::|||::||.|.:|..
 Frog  1436 QRKLSFALSMLGNPDIVLLEEPSTGMDPKNKQIMWKVIRTTLKGKEQAAVITTHSMEEAEAICDR 1500

  Fly  1441 VGIMDHGSLLCYGSLSRLKHRFNMGIFVKVKMGTRAEMDDERDNWMQITMMPPNDSEMGSTVGAR 1505
            |.||..|.|...||:..||.:|.....:::|:.|||                             
 Frog  1501 VAIMVSGQLRYIGSVQHLKSKFGRYFSLELKLDTRA----------------------------- 1536

  Fly  1506 RMMLAHLLRHHNPPVEPVKKSRTSRAQPDTTNSELNMRKDYEALLQELEEVFKKDHPYSTVSEKY 1570
                                    |:|            :.|.|.:|:.::|      ...|.:.
 Frog  1537 ------------------------RSQ------------NVEFLHKEILQIF------PNASHQE 1559

  Fly  1571 SYRGMITFCIPRGQIK-WSAIFEYMENLKDEMQILYYSVSHTTFQDVFMKFVRKQNQ 1626
            |:..::::.:|:..:: .|..|..:|.:|....|..|..|..|.:.||::..::|.:
 Frog  1560 SFSSLMSYKVPKEDVESLSQTFSKLEQVKQMYNIEEYIFSQATLEQVFIELAKEQEE 1616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8908NP_611464.3 rim_protein <124..1626 CDD:130324 385/1684 (23%)
abca5NP_001135599.1 rim_protein <87..1616 CDD:130324 388/1725 (22%)

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