DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS18 and Rps18l1

DIOPT Version :10

Sequence 1:NP_476964.1 Gene:RpS18 / 37292 FlyBaseID:FBgn0010411 Length:152 Species:Drosophila melanogaster
Sequence 2:XP_063126242.1 Gene:Rps18l1 / 100360679 RGDID:2321678 Length:152 Species:Rattus norvegicus


Alignment Length:152 Identity:118/152 - (77%)
Similarity:143/152 - (94%) Gaps:0/152 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVD 65
            ||||||||||||||::||||||:||:..|:||||||||||:::||:|||:||||||||.||:||:
  Rat     1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVE 65

  Fly    66 KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLR 130
            :|:||:.||.|||:|:||||||||:.||||.|:.::.||:|||:|||||||||:||||||:||||
  Rat    66 RVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

  Fly   131 VRGQHTKTTGRRGRTVGVSKKK 152
            ||||||||||||||||||||||
  Rat   131 VRGQHTKTTGRRGRTVGVSKKK 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS18NP_476964.1 PTZ00134 1..152 CDD:185469 116/150 (77%)
Rps18l1XP_063126242.1 None

Return to query results.
Submit another query.