Protein Alignment PCNA and pcn1

DIOPT Version :10

• Sequence 1: NP_476905.1
• Gene: PCNA / 37290
• FlyBaseID: FBgn0005655
• Length: 260
• Species: Drosophila melanogaster
• Sequence 2: NP_596504.1
• Gene: pcn1 / 2540020
• PomBaseID: SPBC16D10.09
• Length: 260
• Species: Schizosaccharomyces pombe
• Alignment Length: 261
• Identity: 137/261 - (52%)
• Similarity: 199/261 - (76%)
• Gaps: 3/261 - (1%)

  Fly     1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKFRCDRN 65
            |.|||..||.:|||:|||||:|:.:|.|||:|:||.|||||:|||:|||:.::||||:.:|||||
pombe     1 MLEARFQQAALLKKLLDAIKELVTDANFDCNDNGISLQAMDSSHVALVSMLIKSDGFEPYRCDRN 65

  Fly    66 LSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPE 130
            :::|:||.:::|:|:||.|||.||:||:|..:.:.::|||...:::|||::|||::||||||||:
pombe    66 IALGINLNALSKVLRCAQNEDLVTLKAEDTPEVLNLVFESEKNDRISDYDVKLMDIDQEHLGIPD 130

  Fly   131 TDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANIKLAQTGSVDKEEEAV 195
            .::...:.|||.||.||.|||...|:||.|..:||||:||..||:|..:..|.|...:..:::::
pombe   131 IEYDATITMPAAEFQRITRDLLTLSDSVTINASKEGVRFSCKGDIGNGSTTLKQHTDLSDQDQSI 195

  Fly   196 IIEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAIKDLGHIRYYLAPKI--EDN 258
            .|.:.:.|||||:.:||..|||||||:|:|.|||..||||:|||.::. |.:|:||||||  ||.
pombe   196 EISLTQAVTLTFSLKYLAQFTKATPLATRVTLSMSNDVPLLVEYKMES-GFLRFYLAPKIGEEDE 259

  Fly   259 E 259
            |
pombe   260 E 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PCNA	NP_476905.1	pcna	1..259	CDD:273158	136/259 (53%)
pcn1	NP_596504.1	pcna	1..258	CDD:273158	134/257 (52%)