Protein Alignment PCNA and pcn-1

DIOPT Version :9

• Sequence 1: NP_476905.1
• Gene: PCNA / 37290
• FlyBaseID: FBgn0005655
• Length: 260
• Species: Drosophila melanogaster
• Sequence 2: NP_500466.3
• Gene: pcn-1 / 177161
• WormBaseID: WBGene00003955
• Length: 263
• Species: Caenorhabditis elegans
• Alignment Length: 260
• Identity: 125/260 - (48%)
• Similarity: 193/260 - (74%)
• Gaps: 1/260 - (0%)

  Fly     1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKFRCDRN 65
            ||||:|..|.:||||:::||||:.:|.||||::.:.|||||:|||:||||.|....||.:||||.
 Worm     1 MFEAKLANAGLLKKIVESIKDLVTDAPFDCSETAMSLQAMDSSHVALVSLKLEVGLFDTYRCDRT 65

  Fly    66 LSMGMNLGSMAKILKCANNEDNVTMKAQDN-ADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIP 129
            :::|::|.:|:|.||||||:|...:|.::| .|::...|....::|..|..:|:|::|.||||||
 Worm    66 INLGLSLANMSKALKCANNDDTCMLKYEENEGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIP 130

  Fly   130 ETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANIKLAQTGSVDKEEEA 194
            :.|::.|..|||.||.:.|:||:.||:|:.|..||.|:.|:..||:|::.:..:.:.:.|.|.||
 Worm   131 DQDYAVVCEMPAGEFQKTCKDLSTFSDSLNITATKAGIVFTGKGDIGSSVVTYSPSSNTDDETEA 195

  Fly   195 VIIEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAIKDLGHIRYYLAPKIEDNE 259
            |.:|:::||.:.|:.:|:|.|||||.||.:|:||:|.|||:||||.|::.|::|:||||||:|:|
 Worm   196 VTLEVKDPVNVNFSIKYMNQFTKATALSDRVRLSLCNDVPVVVEYPIEENGYLRFYLAPKIDDDE 260

  Fly   260  259
             Worm   261  260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PCNA	NP_476905.1	pcna	1..259	CDD:273158	124/258 (48%)
pcn-1	NP_500466.3	pcna	1..260	CDD:273158	124/258 (48%)
		PCNA	4..257	CDD:238322	119/252 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160166725
Domainoid	1	1.000	137	1.000	Domainoid score	I3032
eggNOG	1	0.900	-	-		E1_COG0592
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H1945
Inparanoid	1	1.050	273	1.000	Inparanoid score	I1805
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG62193
OrthoDB	1	1.010	-	-		D1012066at2759
OrthoFinder	1	1.000	-	-		FOG0003572
OrthoInspector	1	1.000	-	-		otm14403
orthoMCL	1	0.900	-	-		OOG6_100882
Panther	1	1.100	-	-	LDO	PTHR11352
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2713
SonicParanoid	1	1.000	-	-		X2443
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	15	14.840