DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsl and RGD1563334

DIOPT Version :9

Sequence 1:NP_611463.1 Gene:Hsl / 37289 FlyBaseID:FBgn0034491 Length:881 Species:Drosophila melanogaster
Sequence 2:XP_578509.2 Gene:RGD1563334 / 502999 RGDID:1563334 Length:411 Species:Rattus norvegicus


Alignment Length:611 Identity:115/611 - (18%)
Similarity:173/611 - (28%) Gaps:269/611 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 SFWFLAESEMMHKLPSIVGSSIKVNRL-------IEL--PAEPLKL---PRRKNFKASDNLSSDV 337
            |.|.|.:.....::|..:...:|.:.|       |.|  ..|.:||   ||...| ..|.|.|  
  Rat    19 SVWVLIKEIFTVRVPPPIRQRVKFHILHYFFQLTIALGNVLEKMKLCSMPRFFCF-LQDLLVS-- 80

  Fly   338 NQNQGDGDFVEIPVPTAHLGPGLPVSVRLLSARRRSGMLGEGRYRGWHKPIPPSPSILFHCHGGG 402
            ..|.|      :.|...|.|   .:.|||...:..|    .|..||          |:|: ||||
  Rat    81 KNNFG------VLVKNLHFG---TIPVRLFQPKTTS----SGPRRG----------IIFY-HGGG 121

  Fly   403 FVAQSSKS-HEL--YLRDWAVALDCPILSVDYSLAPEAPFPRALQEVYYAYCWLLNNTELLGTTA 464
            .:...... |.|  ||   |...|..:|||.|...|:...|...|:...|....|...:..|...
  Rat   122 CMFGGLDCYHNLCSYL---ASETDSVLLSVGYRKLPDHHHPIVYQDCLNATIHFLKELKTYGIDP 183

  Fly   465 ERVVCAGDSAGANLSIGVALKCIE-----------------QGVRVPDGLFLAYCPTLVSFVPSP 512
            |:||.:|:|.||..:..:|...::                 ||:..          .|.|:...|
  Rat   184 EQVVISGESIGAGAAAIIAQALLDRKDLPKFRAQVLINPVIQGINF----------QLPSYQQYP 238

  Fly   513 ARLLCLMDPLLPFGFMMRCLRAYAAPAQETLQQNAKQVEDAAQIRNVPKSN-------VGSLNSS 570
            ..      |.|...|::.|:..|       |..:...::|..:...:|..|       :.|.|..
  Rat   239 NA------PFLSRKFLVTCVCKY-------LAIDLSWMDDMLKGTFIPPDNWKKYKKWLSSDNIP 290

  Fly   571 RRTSMARSPLSPLEASMNPDDESSDTFASASASYHSQTVERTDLPHTEGDNSSCVSFEDDSQPIV 635
            :|..           |..|..||...|                                      
  Rat   291 QRFK-----------SQGPQPESPGPF-------------------------------------- 306

  Fly   636 HYPIEISADPPKDTASAAYIDNFLDKYLIDTATMEVTEETAPEAVQAQANGHAKISSDDDILVET 700
                          ..|||::                                            
  Rat   307 --------------NEAAYLE-------------------------------------------- 313

  Fly   701 GRDLVAIDTLQGRLQEAVNNITNTLTRCTQSYEIHGSNVMAQQDVRNMDALIARSPSEEFAFDVP 765
                             :|:|.|        .|:                               
  Rat   314 -----------------INHIFN--------LEV------------------------------- 322

  Fly   766 KDPFLSPYWASDEWLSQLPETKILTLNMDPCLDDCVMFAKKLKRLGRQVDLEILEGLPHG----- 825
                 ||..|.|:.::|||||.:::...|...||.:::.|:|:..|..|....||...||     
  Rat   323 -----SPLLADDKTIAQLPETLLVSNEYDVLRDDSILYKKRLEDQGVPVTWCHLEDGFHGCIMLF 382

  Fly   826 ---FLNFTMLSNEAMEGSKKCIKSLQ 848
               .|:|. .|::||..:...||.::
  Rat   383 DKKALSFP-CSHKAMSSTVSFIKGIK 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HslNP_611463.1 HSL_N 51..376 CDD:283906 26/102 (25%)
Aes 350..>537 CDD:223730 50/206 (24%)
Abhydrolase 395..>539 CDD:304388 39/163 (24%)
Abhydrolase <767..827 CDD:304388 20/67 (30%)
RGD1563334XP_578509.2 Aes <96..404 CDD:223730 91/517 (18%)
Abhydrolase 114..380 CDD:304388 79/460 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0657
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263520at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.