DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsl and Nceh1

DIOPT Version :9

Sequence 1:NP_611463.1 Gene:Hsl / 37289 FlyBaseID:FBgn0034491 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_001120996.1 Gene:Nceh1 / 294930 RGDID:1311104 Length:408 Species:Rattus norvegicus


Alignment Length:553 Identity:109/553 - (19%)
Similarity:164/553 - (29%) Gaps:229/553 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 SEMMHKLPSIVGSSIKVNRLIELPAEPLKLPRRKNF------KASDNLSSDVNQNQGDGDFVEIP 350
            |.::|.|    |.|   :.||.|           ||      |.|...|..|.....|.|.||:.
  Rat    47 SNLIHSL----GLS---HHLITL-----------NFIIISFGKKSARSSPRVKVTDTDFDGVEVR 93

  Fly   351 VPTAHLGPGLPVSVRLLSARRRSGMLGEGRYRGWHKPIPPSPSILFHCHGGGFVAQSSK--SHEL 413
            |                             :.|..||..|....:.:.||||:...|:|  .::.
  Rat    94 V-----------------------------FEGPPKPDEPLRRSVVYIHGGGWALASAKISYYDQ 129

  Fly   414 YLRDWAVALDCPILSVDYSLAPEAPFPRALQEVYYAYCWLLNNTELLG---TTAERVVCAGDSAG 475
            .....|..|:..|:|::|.|.|:..||..:.:|..|..:.| ..|:|.   ....||..:|||||
  Rat   130 LCTAMAEELNAVIVSIEYRLVPQVYFPEQIHDVIRATKYFL-QPEVLDKYKVDPGRVGVSGDSAG 193

  Fly   476 ANLSIGVALKCIEQGVRVPDGLFLAYCPTLVSFVPSPARLLCLMDPLLPFGFMMRCLRAYAAPAQ 540
            .||:..:..:.                 |.|..:.:..:|..|:.|:|                 
  Rat   194 GNLAAALGQQF-----------------TYVESLKNKLKLQALIYPVL----------------- 224

  Fly   541 ETLQQNAKQVEDAAQIRNVPKSNVGSLNSSRRTSMARSPLSPLEASMNPDDESSDTFASASASYH 605
                    |..|.    |.|.                     .:.|||                 
  Rat   225 --------QALDF----NTPS---------------------YQQSMN----------------- 239

  Fly   606 SQTVERTDLPHTEGDNSSCVSFEDDSQPIVHYPIEISADPPKDTASAAYIDNFLDKYLIDTATME 670
                                      .||:          |:......::|.|...|        
  Rat   240 --------------------------TPIL----------PRHVMVRYWVDYFKGNY-------- 260

  Fly   671 VTEETAPEAVQAQ-ANGHAKISSDDDILVETGRDLVAIDTLQGRLQEAVNNITNTLTRCTQSYEI 734
                   :.|:|. .|.|            |..|:.....|:.||.                   
  Rat   261 -------DFVEAMIVNNH------------TSLDVERAAALRARLD------------------- 287

  Fly   735 HGSNVMAQQDVRNMDALIARSPSEEFAFDVPK--DPFLSPYWASDEWLSQLPETKILTLNMDPCL 797
             .::::.....:|...::..........::|:  |...||..|..|.|..||:|.|||...|...
  Rat   288 -WTSLLPSSIKKNYKPVLQTIGDARIVKEIPQLLDAAASPLIAEQEVLQALPKTYILTCEHDVLR 351

  Fly   798 DDCVMFAKKLKRLGRQVDLEILEGLPHGFLNFT 830
            ||.:|:||:|:..|..|.|:..|...||.:.||
  Rat   352 DDGIMYAKRLESAGVNVTLDHFEDGFHGCMIFT 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HslNP_611463.1 HSL_N 51..376 CDD:283906 19/89 (21%)
Aes 350..>537 CDD:223730 40/191 (21%)
Abhydrolase 395..>539 CDD:304388 35/148 (24%)
Abhydrolase <767..827 CDD:304388 25/59 (42%)
Nceh1NP_001120996.1 Aes 70..385 CDD:223730 99/512 (19%)
Abhydrolase_3 109..382 CDD:285143 84/440 (19%)
Involved in the stabilization of the negatively charged intermediate by the formation of the oxyanion hole. /evidence=ECO:0000250|UniProtKB:Q5NUF3 113..115 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0657
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1263520at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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