DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9864 and tsgA

DIOPT Version :10

Sequence 1:NP_611462.1 Gene:CG9864 / 37287 FlyBaseID:FBgn0034490 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_417823.1 Gene:tsgA / 947869 ECOCYCID:EG11262 Length:393 Species:Escherichia coli


Alignment Length:172 Identity:39/172 - (22%)
Similarity:75/172 - (43%) Gaps:16/172 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LPDYGPRYNWTQSDQALLLGAYFYGYMITSLPAGTLAEMLGARNV----AGYSCLVAGILTALTP 116
            :|:|......:.:|...|:..::..||:.......:......:.:    ||.:.::..:....||
E. coli   229 VPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTP 293

  Fly   117 AAAAWDKYAVFAVRFLIGFLNGVVYPCCHSLVSKWS--PPDEKGKFVASLMGGTFGTVITWPISG 179
            |..||...|       :||.:..:|....:|.|:.:  |..:...||  |..||.||::|:.::|
E. coli   294 AHMAWSILA-------LGFFSSAIYTTIITLGSQQTKVPSPKLVNFV--LTCGTIGTMLTFVVTG 349

  Fly   180 VIIENLGWDWAFYIV-GIFVLVVVAIWFYLVADTPAQHSTIS 220
            .|:|:.|...|.... |::.:|.|..:.........||:|::
E. coli   350 PIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLT 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9864NP_611462.1 MFS_SLC17 16..441 CDD:340876 39/172 (23%)
tsgANP_417823.1 PRK03699 2..393 CDD:235151 39/172 (23%)

Return to query results.
Submit another query.