DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9864 and C18D1.2

DIOPT Version :9

Sequence 1:NP_001261100.1 Gene:CG9864 / 37287 FlyBaseID:FBgn0034490 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:488 Identity:116/488 - (23%)
Similarity:208/488 - (42%) Gaps:81/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IMLFMACL-LSYMMRVNLSINIIAMVEDTSSHENGTEVEA------LPDY------GPRYNWTQS 68
            :.|.:.|| :|....:.|:..||.|    |:..|.|..||      :.|:      ...|.:|.|
 Worm    19 LFLCLLCLSISQSNTLTLNFTIICM----STLHNFTATEASEKSTNVLDFMLHKILQKTYVYTAS 79

  Fly    69 DQALLLGAYFYGYMITSLPAGTLAEMLGARNVAGYSCLVAGILTALTPAAAAWDKYAVFAVRFLI 133
            ...||..|...|.|....|...:.:..|:|:|..:..|.:...||:.|.||....|.:.|:|||.
 Worm    80 QSNLLFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLFSAATTAMIPWAAYLGFYPLLAMRFLQ 144

  Fly   134 GF-------LNGVVYPCCHSLVSKWSPPDEKGKFVASLMGGTF--GTVITWPI-SGVIIENLGWD 188
            |.       |.|:|       ..:|| ...:|.|..:.:...|  |.:.|.|: |.....:.||.
 Worm   145 GIGLSTGFTLIGIV-------TRQWS-MQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSSFGWP 201

  Fly   189 WAFYIVGIFVLVVVAIWFYLVADTPAQHSTISLKEREYIESSLGDTLSNKKKWPPYKELV---LS 250
            ..:|...|..:.:..::|.|..::|..|:.::..|...|:...|:|   |::..|..:::   :.
 Worm   202 AVYYTHSIVTIFIFLLFFTLYRESPVFHTIVTELELSKIQRGKGET---KRQRVPLVQILRDPVV 263

  Fly   251 LPFWSLMMLHYGSMWGLFFLITATPKFLSEVLGFNLSSAGFLSSLPHVARLLCAFGFGAVADWIR 315
            |..|:..:.::   .|:...:..||.:|.::|||::...|..|:||.|.........|..||.::
 Worm   264 LSIWTTALANF---MGIQLTMQFTPTYLHKILGFSVQDTGPFSALPQVITAFVKVSAGYSADKLQ 325

  Fly   316 RRGWLSVTRMRKAFCLP--------SHILPGV--MLIILAYFGRD-PYVCVAIMTIS---LGFN- 365
                         .|.|        |..|.|:  |.:.||..... ||:.:.::.:|   :||| 
 Worm   326 -------------CCTPKTSVRIFNSLALGGMSFMFVGLAIIPTSMPYLGLFMLILSCSIIGFNC 377

  Fly   366 -GAATASNLANSQDLAPNYAGTLYGIINCVGTTPGIFSPLIVAAFTKNENTIDQWHWVFIIGAAA 429
             |....|.:..:|.  .::...:...:||:.   .:.:|:||..|.:|: |.::|:||::.....
 Worm   378 GGFFRCSAIYAAQH--NHFVMGMNSFLNCLA---ALLAPVIVNIFVEND-TWNEWYWVWMSHFVI 436

  Fly   430 YILPALFFWVFGSGKIQKWNEVQTTESREDIVN 462
            ..|..|.|.::..|:..:|  .:.|..::.:|:
 Worm   437 LFLSNLVFQIYAKGEPAEW--TKKTPGKDIVVD 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9864NP_001261100.1 2A0114euk 4..454 CDD:129972 114/478 (24%)
MFS 55..440 CDD:119392 100/425 (24%)
C18D1.2NP_496174.2 MFS 36..448 CDD:391944 108/448 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.