DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9864 and C18H9.5

DIOPT Version :9

Sequence 1:NP_001261100.1 Gene:CG9864 / 37287 FlyBaseID:FBgn0034490 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_495362.1 Gene:C18H9.5 / 174104 WormBaseID:WBGene00016003 Length:464 Species:Caenorhabditis elegans


Alignment Length:446 Identity:104/446 - (23%)
Similarity:177/446 - (39%) Gaps:68/446 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MLFMACLLSYMMRVNLSINIIAM---VEDTSSHENGTEVEALPDYGPRYNWTQ--SDQALLLGAY 77
            ::.:.|..:.|:.:|.:  :|.|   :.:..|..|.|            :|.:  ||.:|...|.
 Worm    38 LICITCTNANMILMNFT--VICMNDVIIEQKSFSNQT------------HWLEKSSDISLTFSAA 88

  Fly    78 FYGYMITSLPAGTLAEMLGARNV-AGYSCLVAGILTALTPAAAAWDKYAVFAVRFLIGFLNGVVY 141
            ..|.:..::||.||....|.|.| ..|..|.|| .|.|.|.|..:....|...|...|....::|
 Worm    89 AVGAIFGTVPAVTLISKYGIRKVLTVYGLLSAG-GTLLMPLAVNYGLIPVLIARLFQGVGASILY 152

  Fly   142 PCCHSLVSKWSPPDEKGKFVASLMGG-TFGTVITWPISGVIIE-NLGWDWAFYIVG--IFVLVVV 202
            ....::...|||.:|.|.|||.|... ....::|.|.:|.:.| :|||...:||.|  ..:..::
 Worm   153 SSIGTISESWSPINEIGTFVAFLSSAFQISNIVTMPTAGFLCESSLGWKSIYYIFGGITVIFYII 217

  Fly   203 AIWFYLVADTPAQHSTISLKEREYIESSLGDTLSNKKKWPPYKELVLSLPFWSLMMLHYGSMWGL 267
            .:|:|  .|||..|..:|..|...|..  |....:.|..|...:.......|.:..:....:.|.
 Worm   218 FLWYY--NDTPNDHKNVSSTELRTIRD--GKIFESSKHRPQNVKFTQIFKNWEVFEISLAIVGGS 278

  Fly   268 FFLITAT---PKFLSEVLGFNLSSAGFLSSLPHVARLLCAFGFGAVADWIRRRGWLSVTRMRKAF 329
            ..:|...   |.:|::|||.|:...|:.:::|:....:..|..|.|.|.:               
 Worm   279 TSVICLNNYGPIYLNKVLGLNIRETGYSNAIPYFFAAIVKFAAGPVTDKL--------------- 328

  Fly   330 CLPSHILPGVMLIILAYFGRDPYVCVAIMTISLGFNGAATASNLANSQDLAPNYAG-TLYGIINC 393
               :||.....|.|.|..   |.:.:||..:.:.|......:.||.:  ::...|| .:.|::.|
 Worm   329 ---AHISERTRLFIFALI---PQLVMAIGYLIMSFTDHVIIAQLAYT--ISVILAGLNVIGMVKC 385

  Fly   394 VGTTPGIFSPLIVAAFTKNENTIDQWHWVFIIGAAAYILPALFFWVFGSGKIQKWN 449
            ..........||:|..:.:.       ||     :|:|||.:...:..:....:|:
 Worm   386 AQIVAEKHLTLIMAVISMSS-------WV-----SAFILPIVIGVICPTNSHAEWS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9864NP_001261100.1 2A0114euk 4..454 CDD:129972 104/446 (23%)
MFS 55..440 CDD:119392 95/395 (24%)
C18H9.5NP_495362.1 2A0114euk 29..437 CDD:129972 104/446 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.