DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9864 and slc-17.6

DIOPT Version :9

Sequence 1:NP_001261100.1 Gene:CG9864 / 37287 FlyBaseID:FBgn0034490 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:465 Identity:115/465 - (24%)
Similarity:200/465 - (43%) Gaps:38/465 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RINLAIMLFMACLLSYMMRVNLSINIIAMVEDTSSHENGTEVEALPDYGPRYNWTQSDQALLLGA 76
            |...|:::..||::..:||....   :|||:...| .|||   ..||.  ...|:..:||.:..:
 Worm    26 RFQTALLISAACVVFGLMRTCFG---MAMVDIVRS-GNGT---FHPDL--HMEWSGDEQANIHTS 81

  Fly    77 YFYGYMITSLPAGTLAEMLGARNVAGYSCLVAGILTALTPAAAAW--DKYAVFAVRFLIGFLNGV 139
            ::.|..|...|:..||:.||.:|:..::.|:....:.|||.:|.:  ..:.|.|:|.::||..|.
 Worm    82 FYIGAFIAVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRSYFPVAAIRLIMGFGYGF 146

  Fly   140 VYPCCHSLVSKWSPPDEKGKFVASLMGGTFGTVITWPISGVIIENL-------GWDWAFYIVGIF 197
            |.|....|:|.|.|..||...:|..   |.|..|...:|..:...|       ||...|.:.|:.
 Worm   147 VIPAGSVLISSWFPLSEKSTAMAIF---TTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIVYGLI 208

  Fly   198 VLVVVAIWFYLVADTPAQHSTISLKEREYIESSLGDTLSNKK----KWPPYKELVLSLPFWSLMM 258
            ..|.:.||...:||.|.:...|:..|..||:.  |....|:.    :..||.:::|:....::..
 Worm   209 GAVFLVIWHVRLADKPRESKYITATELTYIKG--GKQRRNRAETIVRATPYMKIILNGCVCAICA 271

  Fly   259 LHYGSMWGLFFLITATPKFLSEVLGFNLSSAGFLSSLPHVARLLCAFGFGAVADWIRRR--GWLS 321
            ..:...:.|..|:|..||:.......||:..|..||||...:::....|..:||.:::|  ...:
 Worm   272 CSFAQSFVLVALVTYLPKYNQIAFKMNLTHNGIWSSLPFFIQMITKLLFAIIADKVKQRKVNATA 336

  Fly   322 VTRMRKAFCLPSHILPGVMLIILAY--FGRDPYVCVAIMTISLGFNGAATASNLANSQDLAPNYA 384
            ||::..|.   :.....:.::|.||  |.....|.::|:.....|:......| .:...:||.:.
 Worm   337 VTKVSNAI---ASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYN-TSIVTVAPQFT 397

  Fly   385 GTLYGIINCVGTTPGIFSPLIVAAFTKNENTIDQWHWVFIIGAAAYILPALFFWVFGSGKIQKWN 449
            ..:..............:|:::...| :..||.:|...|...|....:..|.|.:||.|:.:.|.
 Worm   398 AFISSYAQLYAQIASTLAPIVIGRIT-SHGTIYEWKCAFYSLAGVLAVTGLIFQIFGHGRTEPWG 461

  Fly   450 EV--QTTESR 457
            |.  ..|.:|
 Worm   462 ETPSNATSAR 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9864NP_001261100.1 2A0114euk 4..454 CDD:129972 113/460 (25%)
MFS 55..440 CDD:119392 95/401 (24%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 107/441 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.