DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk6 and Asic1

DIOPT Version :10

Sequence 1:NP_611461.3 Gene:ppk6 / 37286 FlyBaseID:FBgn0034489 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_063120354.1 Gene:Asic1 / 79123 RGDID:71062 Length:560 Species:Rattus norvegicus


Alignment Length:461 Identity:97/461 - (21%)
Similarity:166/461 - (36%) Gaps:127/461 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 FYSYPILNTISNDLSITDVAFPGVTICSPKVVNSERVDRYVKTLKIPKEYDMAEVIAGFDFLNAF 152
            :.|||.: |:.::::.|::.||.||.|:...|.       :..|..|....:|.::.        
  Rat   113 YLSYPHV-TLLDEVATTELVFPAVTFCNTNAVR-------LSQLSYPDLLYLAPMLG-------- 161

  Fly   153 TDQS------FEPPGHDSYRATDAVL-RLNNVSIWEAAMAVSPGCFDYVKRCFWGHTEFQCNQSH 210
            .|:|      ..|||.:::......| |..|.|                           |::..
  Rat   162 LDESDDPGVPLAPPGPEAFSGEPFNLHRFYNRS---------------------------CHRLE 199

  Fly   211 EYLSFIPTTAYL-GPCCSFNYN---PRNASFVPFSANIFGMDGGLTFVGAEGSERNLNTGLIVLV 271
            :.|.:   .:|. |||...|::   .|......|::   |.||.......:|...|   ||.:::
  Rat   200 DMLLY---CSYCGGPCGPHNFSVVFTRYGKCYTFNS---GQDGRPRLKTMKGGTGN---GLEIML 255

  Fly   272 HHPMD-YVT----------EAAASVTITAQSE-SFVE-----VSPTVQS-----SSVEVLELSER 314
            ....| |:.          ||...|.|.:|.| .|::     |:|..|:     ...:::.|...
  Rat   256 DIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRQLIYLPSP 320

  Fly   315 KRDC---LISGDLQLSNYRQAACLLACQTEAIVKKCGCH--------PYLLPIVGNKFKEC---- 364
            ...|   .:..|. ..:|...||.:.|:|..:|:.|.|.        ||..|   .::|||    
  Rat   321 WGTCNAVTMDSDF-FDSYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTP---EQYKECADPA 381

  Fly   365 -----NLNDTFCYSANYDNFKSVRCDQ-CLPNCYDVTYSTLSYKTDLNQHKYSVSRF-YSPELLN 422
                 ..:..:|.           |:. |....|....|.:...:..:. ||...:| .|.:.:.
  Rat   382 LDFLVEKDQEYCV-----------CEMPCNLTRYGKELSMVKIPSKASA-KYLAKKFNKSEQYIG 434

  Fly   423 NDSFVLRVYLAKQVVPVIRKVTVMSWIGLLSDLGGIFNLCLGLSMISVVEFFYYC----TYRLYI 483
            .:..||.::........|.:.......|||.|:||...|.:|.|:::|:|.|.|.    .:||..
  Rat   435 ENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCR 499

  Fly   484 NYQLQK 489
            ..:.||
  Rat   500 RGKCQK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk6NP_611461.3 ASC 85..476 CDD:459966 92/442 (21%)
Asic1XP_063120354.1 None

Return to query results.
Submit another query.