DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk6 and rpk

DIOPT Version :9

Sequence 1:NP_611461.3 Gene:ppk6 / 37286 FlyBaseID:FBgn0034489 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster


Alignment Length:577 Identity:122/577 - (21%)
Similarity:211/577 - (36%) Gaps:147/577 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RKRGKDPSLIRTAILATFWEYTERTKVSGM-WLMRRNRTYGLSRFIWSSVLLQLLLLSIY--LTL 82
            |:|.|..|:.....:.|:.||...|.:.|: :|..:.|.: ..|..|    |.:.|:|||  .||
  Fly    19 RRRRKAGSVACEGFITTYHEYCRNTSIHGVQYLGEQERPF-RERIFW----LFVFLISIYGCSTL 78

  Fly    83 L--LWLKFYSYPILNTIS-NDLSITDVAFPGVTICSPKVVNSERVDRYVKTLKIPKEYDMAEVIA 144
            :  .:.|:...|::.:.: ....:.::.||.||:||             :|.::.|:.......|
  Fly    79 IQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCS-------------ETKRVLKQKGKETTYA 130

  Fly   145 GFDFLNAFTD-----QSFEPPGHDSYRATD--AVLRLNNVSIWEAAMAVSPG----CFDYVKR-- 196
              |..:.|::     :.|.|....:....:  .:|.:.|..|.|..:.:..|    .||.::|  
  Fly   131 --DLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQRML 193

  Fly   197 ---------CFWGHTEFQCNQSHEYLSFIPTTAYLGPCCSFN------------YNPRNASFVPF 240
                     |.|.....:|.     ..|..|....|.|.:||            |..:::.....
  Fly   194 PQFDRYFFYCRWLSRFGECE-----TFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLE 253

  Fly   241 SANI------------FGMDGGL-TF------VGA-------------------EGSERNLNTGL 267
            ..||            :.:|..: ||      .||                   .|..:....|.
  Fly   254 MENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGK 318

  Fly   268 I--VLVHHPMDYVTEAAASVTITAQSESFVEVSPTVQSSSVEVLELSERKRDCLISGDLQL---S 327
            .  ||:|.|.|....:...|.|....|..:.|.|.:.:.|..:.|....:|.|.:|.:..|   .
  Fly   319 FENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHERSLRFFK 383

  Fly   328 NYRQAACLLACQTEAIVKKCGCHPYLLPIVGNKFKECNLNDTFCY------------------SA 374
            .|.::.|.|.|.....:.||||..:.:| .......|..:...||                  :|
  Fly   384 VYTESNCQLECLANFTLTKCGCVKFSMP-RNVDMPVCGEDKIHCYDRAERELLVREFKRVKALNA 447

  Fly   375 NYDNFKSVR--CDQCLPNCYDVTYSTLSYKTDLNQHKYSVSRFYSPELLNNDSFV---------- 427
            ..:|.:||.  |: |:|.|     ::|.|.|:::|..:.:......|  .:..|:          
  Fly   448 GRENSRSVESACN-CMPAC-----TSLVYNTEISQANFDLEEMLVAE--GDTEFLKEYPGSQMSR 504

  Fly   428 LRVYLAKQVVPVIRKVTVMSWIGLLSDLGGIFNLCLGLSMISVVEFFYYCTYRLYIN 484
            |.:|..:......::..:......|::.||||.|.:|.|::|:||..|:.|.||:.|
  Fly   505 LSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTN 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk6NP_611461.3 ASC 85..476 CDD:279230 97/498 (19%)
rpkNP_001246909.1 ASC 39..552 CDD:279230 111/546 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456721
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D112386at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
65.850

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