DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk6 and scnn1a

DIOPT Version :9

Sequence 1:NP_611461.3 Gene:ppk6 / 37286 FlyBaseID:FBgn0034489 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001184124.1 Gene:scnn1a / 395013 XenbaseID:XB-GENE-996083 Length:633 Species:Xenopus tropicalis


Alignment Length:554 Identity:113/554 - (20%)
Similarity:217/554 - (39%) Gaps:136/554 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KRGKDPSLIRTAILATFWEYTE-------RTKVSGMWLMRRNRTYGLSRFIWSSVLLQLLLLSIY 79
            |..|:|      ::..|..|.|       .|.:.|...:..:|:..:....|..:.|....|..:
 Frog     6 KNEKEP------LIEFFSSYRELFEFFCSNTTIHGAIRLVCSRSNRMKTAFWLVLFLATFGLMYW 64

  Fly    80 LTLLLWLKFYSYPILNTISNDLSITDVAFPGVTICSPKVVNSERVDRYVKTLKIPKEYDMAEV-- 142
            ...||:.:::|||:  :|:.:::...:.||.||:|:......:.:...::.|....:..:.|:  
 Frog    65 QFGLLFGQYFSYPV--SINLNVNSDKLPFPAVTVCTLNPYRYKAIQNDLQELDKETQRTLYELYK 127

  Fly   143 -----IAGFDFLNAFTDQ---------SFEPPGHDSYRATDAVL--------RLNNVSIWEAAMA 185
                 :.|:...|....:         ...|||..::|.:.:|:        |..|:. ::....
 Frog   128 YNSTGVQGWIPTNQRVRRDRPGLPHLLELVPPGSKTHRVSRSVIEEELQVKRREWNIG-FKLCNE 191

  Fly   186 VSPGCF--------DYVKRCFWGH----------------------------TEFQC---NQSHE 211
            ....||        |.::..:..|                            .|..|   |.||.
 Frog   192 TGGDCFYQTYTSGVDAIREWYRFHYINILARVPEEAAIDGEQLENFIFACRFNEESCTKANYSHF 256

  Fly   212 YLSFIPTTAYLGPCCSFNYNPRNASFVPFSANIFGMDGGLTFVGAEGSERNLNTGLIVLVHHPMD 276
            :      .|..|.|.:||.| |:.....:|:::.|:..|||               ::|.....|
 Frog   257 H------HAIYGNCYTFNQN-RSGQSNLWSSSMPGIKNGLT---------------LILRTEQHD 299

  Fly   277 YV----TEAAASVTITAQSE-SFVE-----VSPTVQSS----SVEVLELSERKRDCLISG-DLQL 326
            |:    :.|.|.|.:....| :|::     :.|.:::|    ...|..:..:..||...| |:.:
 Frog   300 YIPLLSSVAGARVLVHGHKEPAFMDDSGFNIPPGMETSIGMKKETVNRMGGKYSDCSEDGSDVDV 364

  Fly   327 SN-----YRQAACLLACQTEAIVKKCGCHPYLLPI-VGNKFKECNLNDTF--CYSANYDNFKS-- 381
            .|     |.:..|:.:|...|:|::|||.....|: .|::|.:.|.:.::  ||......|.|  
 Frog   365 KNLFESEYTEQVCVRSCFQAAMVERCGCGYAFYPLSPGDEFCDYNKHKSWGHCYYKLIIEFTSNK 429

  Fly   382 ----VRCDQ-CLPNCYDVT--YSTLSYKTDLNQHKYSVSRFYSPELLNNDSFV-LRVYLAKQVVP 438
                .:|.: ||.:.|.:|  ||....:...:...:::||.|:  |.:.:... |.:|..:....
 Frog   430 LGCFSKCRKPCLVSEYQLTAGYSKWPNRVSQDWVFHTLSRQYN--LTDRNGIAKLNIYFEELNYK 492

  Fly   439 VIRKVTVMSWIGLLSDLGGIFNLCLGLSMISVVE 472
            .|::...::.:.|||.||..::|..|.|::||||
 Frog   493 TIQESPTINMVMLLSLLGSQWSLWFGSSVLSVVE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk6NP_611461.3 ASC 85..476 CDD:279230 99/484 (20%)
scnn1aNP_001184124.1 ENaC 18..602 CDD:273304 109/536 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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