DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk6 and del-4

DIOPT Version :9

Sequence 1:NP_611461.3 Gene:ppk6 / 37286 FlyBaseID:FBgn0034489 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:522 Identity:120/522 - (22%)
Similarity:187/522 - (35%) Gaps:147/522 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WEYTERTKVSGM----WLMRRNRTYGLSRFIWSSVLLQLLLLSIYLTLLLWLKFYSYPILNTISN 99
            |..|......||    ||          |..|..|::..:.|.|:..:.|...:.|:.: || ..
 Worm    18 WTSTHGVPHIGMANARWL----------RAFWILVVVVSIALFIWQFITLLTNYLSFSV-NT-ET 70

  Fly   100 DLSITDVAFPGVTIC--SP-KVVNSERVDRYVKTLKIPKEYDMAEVIAGFDFLNAFTDQSFEPPG 161
            .|...:..||.||||  :| |:..::.||.           ||:.:|..::     :|.|....|
 Worm    71 TLQFAERTFPTVTICHLNPWKLSETKSVDP-----------DMSALIDAYN-----SDSSSAQFG 119

  Fly   162 HDSYRATDAVLRLNNVSIWEAAMAVSPGCFDYVKRCFWGHTEFQCNQ----SHEYLSFIPTTAYL 222
            ..:....|   |....|.|...         |.:|.    .|.|.|.    ::.|...:.:..|.
 Worm   120 LPASLTAD---RQQQASKWTLM---------YSERL----NEKQYNDAADIAYSYDDMVVSCTYN 168

  Fly   223 GPCCS---FN--YNPRNASFVPFSANIFGMDGGLTFVGAEGSERNLNTGLIVLVHHPMD-YV--T 279
            ...|:   ||  |||...:.:.|  |..||        ...|......||.:::....| |:  |
 Worm   169 AKTCNITDFNDFYNPSYGNCLQF--NTDGM--------YSSSRAGPLYGLRMVMRTDQDTYLPWT 223

  Fly   280 EAA-ASVTITAQSE-----SFVEVSPTVQSSS-----VEVLELSERKRDCLISGDLQLSNYRQA- 332
            ||: ..:.|..|.|     .|...:|...:||     |:...||:....|.....|:.::|... 
 Worm   224 EASGVIIDIHMQDEIPYPDVFGYFAPPGTASSLGVSYVQTTRLSKPYGSCTTKTKLKTTHYTGTY 288

  Fly   333 ---ACLLACQTEAIVKKCGCHPYLLPIVGN--KFKEC--------NLNDTFCY-------SANYD 377
               ||..:|..|.|:..|||:........|  ::..|        |||   |.       |..:|
 Worm   289 TVEACFRSCMQEKIIASCGCYYPAYSHASNTTQYVSCDNGVQTLSNLN---CVDLINSADSTEFD 350

  Fly   378 NFKSVRCDQ-CLPNCYDVTYSTLSYKTDLNQHKYSVSRFYSPELLN------------------- 422
            ......|.| |..:.|.||.||..:.:|          .|.|...|                   
 Worm   351 VLTDCDCPQPCEIDSYGVTVSTAQWPSD----------SYVPTECNPGGPSGPWDASGESCLDWY 405

  Fly   423 -NDSFVLRVYLAKQVVPVIRKVTVMSWIGLLSDLGGIFNLCLGLSMISVVE--------FFYYCT 478
             .::.::.:|..:....|:.:....:::..:||:||...|.||:|:||.:|        |||.||
 Worm   406 KANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIFLVFFYCCT 470

  Fly   479 YR 480
            ::
 Worm   471 HK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk6NP_611461.3 ASC 85..476 CDD:279230 105/466 (23%)
del-4NP_492230.2 ASC 8..466 CDD:295594 115/514 (22%)
deg-1 14..460 CDD:273309 115/508 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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