DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk6 and acd-4

DIOPT Version :9

Sequence 1:NP_611461.3 Gene:ppk6 / 37286 FlyBaseID:FBgn0034489 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_505230.1 Gene:acd-4 / 185036 WormBaseID:WBGene00017879 Length:613 Species:Caenorhabditis elegans


Alignment Length:531 Identity:117/531 - (22%)
Similarity:198/531 - (37%) Gaps:145/531 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LIRTAILATFWEYTER----TKVSGMWLMRRNRTYG--LSRFIWSSVLLQLLLLSIYLTLLLWLK 87
            |.:|..:.:.::.|:.    |.|:|    .|...||  .::..|..|::.:|...:|..::|...
 Worm    23 LRKTEGVGSVYQETQHFSTITTVNG----PRRIFYGKRSAQIFWILVVISILAFLVYQIVILIQY 83

  Fly    88 FYSYPILNTISNDLSITDVAFPGVTICSPKVVNSERVDRYVKTLKIPKEYDMAEVIAGFDFLNAF 152
            |||.|.|:.|:...:...|.||.||:|:   :|.      |||..|.|             ||:.
 Worm    84 FYSKPTLSQINFITNEGAVYFPSVTVCN---LNP------VKTSFIKK-------------LNSS 126

  Fly   153 TDQSFEPPGHDSYRATDAVLRLNNVSIWE---------AAMAVSP-------------GCFDYVK 195
            .|.|.|...:.....|:::...||.:|:|         ..:|..|             .|.:..:
 Worm   127 GDLSEELLNYLLATKTNSMYMFNNANIFELKRAHLNALVYLANHPDFEIVNFLNSAQFDCDELFE 191

  Fly   196 RCFWGHTEFQCNQSHEYLSFIPTTAYLGPCCSFNYNPRNASFVPFSANIFGMDGGLTFVGAEG-- 258
            .||:|..:|.|   .:|::...|:  ||.|  :..|.||.:           |..||..|..|  
 Worm   192 TCFYGGKQFNC---CKYMTQSITS--LGRC--WELNLRNET-----------DAWLTKKGRSGTS 238

  Fly   259 -------------SERNLN--------TGLIVLVHHPMDYVTEAAASVTITAQSESFVEVSPT-V 301
                         ||:.:|        .|....:|.|  :|:...|:..||        |||: |
 Worm   239 PKTGLQIIANARQSEQFINFHYSSFQENGFRYFIHPP--HVSPDLAAEGIT--------VSPSRV 293

  Fly   302 QSSSVEV----LELSERKRDCLISGDLQLSN---YRQAACLLACQTEAIVKKCGCHPYLLPIVGN 359
            .:|:::.    |...|...:|..|.....:.   |..:||...|.:....|.|||.||...|..|
 Worm   294 VNSAIKTVLHDLLNHENWGNCTSSWPEHYNTNLPYSSSACQALCVSNYFKKLCGCSPYSYNIDNN 358

  Fly   360 ---------------KFKECNLNDTFCYSANYDNFKSVRCDQCLPNCYDVTYST-LSYKTDLNQH 408
                           |..:.:.|.|......:       |.:|...|...:||: .||....|  
 Worm   359 TQVCLPYEEVICMMEKMTKSDSNGTVSLDFPF-------CAECHLACQKTSYSSYTSYGDGFN-- 414

  Fly   409 KYSVSRFYSPELLNNDSF------VLRVYLAKQVVPVIRKVTVMSWIGLLSDLGGIFNLCLGLSM 467
             |:..::.:.|...:.|:      ::.::..:.......:|...:.:...:.:.|:..|..|:|:
 Worm   415 -YNSMKWLTRETNRSASYIRQNIAIINIHFMELFYTSYSQVKATTILNTFNKIFGLNGLWFGMSV 478

  Fly   468 ISVVEFFYYCT 478
            :|:.|...|.|
 Worm   479 VSLTELILYFT 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk6NP_611461.3 ASC 85..476 CDD:279230 101/465 (22%)
acd-4NP_505230.1 ASC 39..487 CDD:279230 112/511 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162284
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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