DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk6 and del-8

DIOPT Version :9

Sequence 1:NP_611461.3 Gene:ppk6 / 37286 FlyBaseID:FBgn0034489 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_509617.2 Gene:del-8 / 182514 WormBaseID:WBGene00007518 Length:553 Species:Caenorhabditis elegans


Alignment Length:470 Identity:102/470 - (21%)
Similarity:174/470 - (37%) Gaps:108/470 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 YGLS----------RFIWSSVLLQLLLLSIYLTLLLWLKFYSYPILNTISNDLSITD-VAFPGVT 112
            :|||          |..|..|::..:.|..:.|:|:.:::...|  ...|..:.:.| :.||.:|
 Worm    39 HGLSQALMSKTLRMRIFWWIVIIICISLGAFTTVLIIIEYIQGP--TATSTTIRLVDSLEFPAIT 101

  Fly   113 ICSPKVVNSERVDRYVKTLK--IPKEYDMAEVIAGFDFLNAFTDQS-FEPPGHDSYRATDAVLRL 174
            || |||.:|..:......:|  :|   |:::..|. |.|..|...| .|.....:|.....:..|
 Worm   102 IC-PKVPDSFNITGLRGDIKESLP---DISDKTAD-DLLEFFVAGSGLENMNDVTYFNRTYLSHL 161

  Fly   175 NN-VSIWEAAMAVSPGCFDYVKRCFWGHTE---FQCNQSHEYLSFIPTTAYLGPCCS-------- 227
            || ..||....:|. |.|:.:::.:....|   ::|..:.:.|.          ||:        
 Worm   162 NNYYKIWSEGYSVD-GFFEIIQQKYGYKCEDLFYECQLAGKILD----------CCNDLMVRRVV 215

  Fly   228 ----------FNYNPRNASFVPFSANIFGMDGGLTFVGAEGSERNLNTGLIVLVHHPMDYVTEAA 282
                      .|.|...|..:  ...:|.:....::...:  .....|.|||.:....|.|||..
 Worm   216 MRRGICYQTRKNVNQSEADDI--GRIVFSLKAPTSYTSVK--TNYTQTQLIVYITDNHDVVTEFP 276

  Fly   283 A---------SVTITAQSESFVEVSPTVQSSSVEVLELSERKRDCLISGDLQLSNYRQAACLLAC 338
            .         .:..||:   .:|:   :|:..|....:..|..:||:. ...|||          
 Worm   277 RFYLYPNEWNRMRFTAR---LIEL---IQNKGVCTNHIFGRDAECLVR-KWYLSN---------- 324

  Fly   339 QTEAIVKKCGCH-PYL-----LPIVGNKFKECNLNDTFCYSANYD-NFKSVRCDQCLPNCYDVTY 396
                |:....|. |||     ||......|...:.|.:.....|. |...|. ::|.|.|     
 Worm   325 ----IIIPFNCTLPYLKSITKLPPTTGVCKPDVIADNYLDKIQYVWNSAEVN-EECTPGC----- 379

  Fly   397 STLSYKTDLNQHKYSVSRFYSPELLNNDSFVLRVYLAKQVVPVIRKVTVMSWIGLLSDLGGIFNL 461
            :...|:|.:.|     |:..||  ..:.:|.|...........::::...|..|.:|.:||.|..
 Worm   380 NRWDYQTSVQQ-----SQTLSP--FEDYTFNLEASFNDLQYEYVKEIYTTSIPGFMSQIGGQFGF 437

  Fly   462 CLGLSMISVVEFFYY 476
            .||||:|::::...|
 Worm   438 FLGLSIITLIQMVLY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk6NP_611461.3 ASC 85..476 CDD:279230 92/432 (21%)
del-8NP_509617.2 ASC 38..452 CDD:279230 101/468 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162292
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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