DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacl and PDC6

DIOPT Version :9

Sequence 1:NP_611460.1 Gene:Hacl / 37285 FlyBaseID:FBgn0034488 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_011601.3 Gene:PDC6 / 852978 SGDID:S000003319 Length:563 Species:Saccharomyces cerevisiae


Alignment Length:568 Identity:120/568 - (21%)
Similarity:216/568 - (38%) Gaps:109/568 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEVEAVQIIAESLKQQGVEYVFGIIG-IPVIELSMAFQAAGLKYIGMRNEQAACYAAQAIGYLT 64
            |:|:...:.:.|.|||..|..:||:.| ..:..|...::..||::.|..||..|.|||.....:.
Yeast     1 MSEITLGKYLFERLKQVNVNTIFGLPGDFNLSLLDKIYEVDGLRWAGNANELNAAYAADGYARIK 65

  Fly    65 GKPGVCLVVSGPGLLHVTGGMANAQVNCWPLIVIGGATNQD--------HEGIGGFQECPQVELS 121
            |. .|.:...|.|.|....|:|.:......::.:.|..:..        |..:|.........:|
Yeast    66 GL-SVLVTTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMS 129

  Fly   122 RPYCKYAARPATAALIPLHVEKAVRYATYGRPGVAYLDFPGNILQSKAQEASIYKALAHPAPPLA 186
            ....:..:.....|..|..:::.:| .|:.....:||..|.|::..|...:.:.|.:     .|:
Yeast   130 ANISETTSMITDIATAPSEIDRLIR-TTFITQRPSYLGLPANLVDLKVPGSLLEKPI-----DLS 188

  Fly   187 YPPHD-----DVI-RAAKLLRQAKRPLVIVGKGSAYAHAENTLRHFIENTNLPFLPTPMGKGVVS 245
            ..|:|     :|| ...:|::.:|.|:::....::..:.:...:..|:.|..|...||:|||.:.
Yeast   189 LKPNDPEAEKEVIDTVLELIQNSKNPVILSDACASRHNVKKETQKLIDLTQFPAFVTPLGKGSID 253

  Fly   246 DTAP------------QCVSSARTLALQKADVVLLLGARLNWILHFGKAPRYDKDVKFIQVDINP 298
            :..|            |.|..    |::.||::|.:||.|:                    |.|.
Yeast   254 EQHPRYGGVYVGTLSKQDVKQ----AVESADLILSVGALLS--------------------DFNT 294

  Fly   299 EELHNSVVASVAIQADIRPFAEQLFEQMNA----VNFRFGYEQ---------DWWKQLAVKCKQN 350
            .....|......::     |.....:..||    |..:|..:.         ..:|.:.|..|  
Yeast   295 GSFSYSYKTKNVVE-----FHSDYVKVKNATFLGVQMKFALQNLLKVIPDVVKGYKSVPVPTK-- 352

  Fly   351 RDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEGANTMDIGRSMLLNEQPRHRLDAGTFGT 415
              |.....:...|||....:::.|.:.|.:..:|:|| ..|...|.:..:..:..:.:....:|:
Yeast   353 --TPANKGVPASTPLKQEWLWNELSKFLQEGDVIISE-TGTSAFGINQTIFPKDAYGISQVLWGS 414

  Fly   416 MGVGPGFAVAAALFCRDFAPGKRVLCVEGDSAFGFSGMEIETMVRYKLPVTIVIVNNNGIYGGFD 480
            :|...|..:.||....:..|.|||:...||.:...:..||.||:|:.|...:.::||:|.     
Yeast   415 IGFTTGATLGAAFAAEEIDPNKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGY----- 474

  Fly   481 KDTFEAIRSEGDLTQITPPSALGVQVRYEE--------MMKMFGMKGY 520
              |.|.:        |..|.|     .|.|        ::..||.|.|
Yeast   475 --TIEKL--------IHGPHA-----EYNEIQTWDHLALLPAFGAKKY 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaclNP_611460.1 PRK09259 8..552 CDD:236433 118/561 (21%)
TPP_PYR_POX_like 8..161 CDD:132918 35/161 (22%)
TPP_enzyme_M 195..322 CDD:278628 25/138 (18%)
TPP_BZL_OCoD_HPCL 367..550 CDD:238962 38/162 (23%)
PDC6NP_011601.3 PDC1 1..563 CDD:226470 120/568 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S956
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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