DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Efhc1.2 and efhc2

DIOPT Version :9

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001296746.1 Gene:efhc2 / 567323 ZFINID:ZDB-GENE-031001-10 Length:748 Species:Danio rerio


Alignment Length:741 Identity:281/741 - (37%)
Similarity:401/741 - (54%) Gaps:58/741 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MPMLPGAQF-YDRGKRRHPRQQTLMHYQGIQMLSDRREPELVEPNGIVADPKCPPVPAQLNSLWA 70
            :|||||... .:.||.:..:.|...:..|:.|:....:|      ||..|...........|.:.
Zfish     3 LPMLPGNSVNRNLGKDKFHKSQHFDYSNGVAMMVGTEKP------GIGGDLLLGQSARAKYSRFP 61

  Fly    71 PKATTKLPPWLAYDKQVLCFNAYFKENLTEIYHAPYQVRKVKIFFYLEDGTMQVTEPKVENSGIP 135
            ....:..|.|||:|||||||:|||.|::.:.....|:|||.||:|||||.|:||.||:.:|||||
Zfish    62 KGEGSGAPAWLAFDKQVLCFDAYFNEDVPQRREEKYRVRKCKIYFYLEDDTIQVVEPEFKNSGIP 126

  Fly   136 QGCLVHRQRIPKAPPTDREFISIFDLNVDTDVQIFDRVYHISGCDVFTRQFLNRAGIFVPEAQQE 200
            ||.|:.|.|||...|.|..|.::...|::.:|..:.|.:.|:.||.|||.||.:.|:.:......
Zfish   127 QGTLIRRHRIPLPAPKDDCFYNVHHFNINQEVVFYSRNFMITDCDPFTRNFLIKMGVRLNPPAST 191

  Fly   201 PCDPTTEIRKRSGLKQTGNTATSALPKKHAFAQFLEFDRRVLKFQGYWND-RSEFGDVRKLEVCY 264
            |.||.|.:|:.   .:..........:.....||||.||:||:|..||:| .|.|||.|:|.:.|
Zfish   192 PADPYTTLRQE---LEENMKPLRPYERLDTLKQFLEHDRQVLRFYCYWDDSESMFGDPRELILHY 253

  Fly   265 YLADDTIDIKEKFPRNSGREGPTTFLKRGKLPKEFSGLP--LPGQQTAMTLLNVLGNSMRDVRYV 327
            :|||||:::.|..|.||||:....||.||||||. :.:|  .||:.|..|:|||.|...:..||:
Zfish   254 FLADDTMEMYEVVPPNSGRDTVPKFLHRGKLPKH-APIPKRQPGEITDRTVLNVFGPVGQGGRYI 317

  Fly   328 ADPLNTGQKEVQHYTDQDLQIGAVLNVFGRSVVLTSCDQFTQSYYREKYGIQEF-------SPQP 385
            .|.|.||..|.:.|.|.||.||||:||:||.|::..||.||:.|||.||||::|       ||.|
Zfish   318 LDSLKTGALEEEFYKDSDLTIGAVINVWGRRVLICDCDYFTKEYYRSKYGIEDFPSISYKASPPP 382

  Fly   386 IPERSDIRPYTQGGMGSRRLPPYNGWGSHEDSEGNCITVEPKPPQADFKKLFKYD-----GCILR 445
            .|              ::::|||.|:||.|||..:|..:.|||||.|||||.:.|     ..:||
Zfish   383 KP--------------AKQVPPYTGFGSEEDSLCSCQGLLPKPPQKDFKKLMEKDRQGLVSNVLR 433

  Fly   446 FGAKLISAIRDNGERDFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPGQDMYSSSRPE 510
            |..|:::....:.||.|:|.::|.|||:.::|..:||||.:||:||:|.||..|||:::.|...|
Zfish   434 FVGKMLTDSPVDKERVFIICFYLTDDTIAVFEPPQRNSGVIGGKFLERGRVKKPGQELFKSEMSE 498

  Fly   511 YYRANDFYIGRTMTLKDHIFHIVSADEFTLMYMEQHPSEFPVADIQKIMQKIR---EAVRPDYKQ 572
            |:.|.|.|:|..:.|....|.:|.||:||..|||||..|||.|:|..|:.|::   |..:...||
Zfish   499 YFTAQDLYVGAHLLLNSQPFQLVDADDFTFSYMEQHADEFPKANIGTIISKVKSISEEQQKKVKQ 563

  Fly   573 FVLRCKPDGDLGDYTAVSFETLRSTLLSYLSKDCLLNHEIVTVCRFFSAEQAMPPSCDRNRVRAA 637
            |.....| ...|.....||.||.:.|...||:     |||:|:.|.:|..|  .|..:...:.|.
Zfish   564 FFTMSDP-SSTGSLPYESFRTLLADLDVELSE-----HEIMTLGRVYSVRQ--QPEVNVGLMLAV 620

  Fly   638 AQLELKRALWNGMDQLNDHLSHINPACKPYISEGQVRSTLRGCRLPFSLELVEDILMVLQRN--G 700
            ||..||:..:....::....:|.:......:|..:.|...:..|||.|    :|:|..|...  |
Zfish   621 AQDHLKKKNFEKFSEMIQAFTHEDRDRCGQLSSKEARIICKAFRLPLS----DDLLRALLEKFAG 681

  Fly   701 QNE-IEVRDFLAFFNMRNDQVPDIAP 725
            ::| |:...||:..|.|.:.||.:.|
Zfish   682 ESEKIDYHAFLSGINWRENPVPAVLP 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921 53/106 (50%)
DUF1126 112..144 CDD:284078 21/31 (68%)
DM10 238..376 CDD:128921 70/140 (50%)
DUF1126 262..294 CDD:284078 15/31 (48%)
DM10 440..547 CDD:128921 46/111 (41%)
DUF1126 463..495 CDD:284078 15/31 (48%)
efhc2NP_001296746.1 DM10 75..178 CDD:128921 51/102 (50%)
DUF1126 103..135 CDD:284078 21/31 (68%)
DM10 226..366 CDD:128921 70/140 (50%)
DUF1126 250..283 CDD:284078 15/32 (47%)
DM10 429..535 CDD:128921 45/105 (43%)
DUF1126 451..483 CDD:284078 15/31 (48%)
FRQ1 553..691 CDD:227455 39/149 (26%)
EFh 635..695 CDD:298682 15/63 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580878
Domainoid 1 1.000 125 1.000 Domainoid score I5412
eggNOG 1 0.900 - - E1_KOG0043
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11863
Inparanoid 1 1.050 446 1.000 Inparanoid score I1608
OMA 1 1.010 - - QHG56477
OrthoDB 1 1.010 - - D126718at33208
OrthoFinder 1 1.000 - - FOG0002682
OrthoInspector 1 1.000 - - otm26521
orthoMCL 1 0.900 - - OOG6_101134
Panther 1 1.100 - - LDO PTHR12086
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4447
SonicParanoid 1 1.000 - - X4557
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.