DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efhc1.2 and efhc1

DIOPT Version :10

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_957261.1 Gene:efhc1 / 393942 ZFINID:ZDB-GENE-040426-1300 Length:554 Species:Danio rerio


Alignment Length:588 Identity:201/588 - (34%)
Similarity:297/588 - (50%) Gaps:82/588 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GMPMLPGAQFYDRGKRRHPRQQTLMHYQGIQMLSDRREPELVEPNGIVADP--KCPPVPAQLNSL 68
            |:|.|||..|.|..|....|.|||....|   .:..|.|.:    ||..||  ......::.|.|
Zfish     8 GLPFLPGNTFRDLTKSAFHRAQTLDFKNG---YAQPRRPVV----GIGQDPLLSVNISHSERNQL 65

  Fly    69 WA--PKAT----------TKLPPWLAYDKQVLCFNAYFKENLTEIYHAPYQVRKVKIFFYLEDGT 121
            ..  |..|          ..:|...||||:||.|..||::.:...:...:::|.|..:::|||.:
Zfish    66 ITDIPNLTYGTDRSHLPLEFIPAHAAYDKKVLRFYGYFRQEVLHSWDEHFRIRPVVFYYHLEDDS 130

  Fly   122 MQVTEPKVENSGIPQGCLVHRQRIPKAPPTDREFISIF---DLNVDTDVQIFDRVYHISGCDVFT 183
            :.||||.|||||||||.|:.|||:.|.|..|     ::   ||||..|:.:|..||.|:.||.||
Zfish   131 ICVTEPPVENSGIPQGKLIKRQRLSKNPRGD-----LYHWKDLNVGMDINLFGEVYRITHCDPFT 190

  Fly   184 RQFLNRAGIFVPEAQQEPCDPTTEIRKRSGLKQTGNTATSALP--KKHAFAQFLEFDRRVLKFQG 246
            :.|:...||.:.|.:..|.||.|       .::..|..|...|  ..|...:||..||:||:|..
Zfish   191 QDFMESQGIVLNEFESIPSDPYT-------ARRAHNQQTHITPYDHNHQLERFLALDRQVLRFFA 248

  Fly   247 YWNDR-SEFGDVRKLEVCYYLADDTIDIKEKFPRNSGREGPTTFLKRGKLPKEFSGL--PLPGQQ 308
            .|:|. |.:|:.|.:.:.|||.||:::|.|....||||:.....|:|.|:||.....  |.|.  
Zfish   249 LWDDSDSLYGEKRPVTLHYYLVDDSVEICEHHEANSGRDPFPVLLRRQKIPKHIKPTCEPFPS-- 311

  Fly   309 TAMTLLNVLGNSMRDVRYVADPLNTGQKEVQHYTDQDLQIGAVLNVFGRSVVLTSCDQFTQSYYR 373
                  .||..|..||:             :::..||.::|..:|:.||..:|..||.||..||:
Zfish   312 ------CVLEVSPHDVK-------------EYFCPQDFRVGEEVNLMGRRFLLYDCDDFTHKYYQ 357

  Fly   374 EKYGIQEFSPQPIPERS--DIRPYTQGGMGSRRLPPYNGWGSHEDSEGNCITVEPKPPQADFKKL 436
            ..:......|..:..|:  ||:         |.:|||||:||.|||..||:::.|:||:.:..||
Zfish   358 HHHPDIPIKPFTVDTRTQQDIK---------RVIPPYNGFGSLEDSLQNCLSLIPQPPKKNVIKL 413

  Fly   437 FKYDGCILRFGAKLISA-IRDNGERDFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPG 500
            .:.|..:||:.|:|.|. ..|.|.| |::|:.||||.:.|:|.|.||||.:||:||::.|:|.||
Zfish   414 LENDHKVLRYAARLDSQNPLDEGRR-FILSFHLADDMISIFEKSTRNSGIIGGKFLEKTRIPKPG 477

  Fly   501 QDMYSSSRPEYYRANDFYIGRTMTLKDHIFHIVSADEFTLMYMEQHPSEFPVADIQKIMQKIREA 565
            .   ::.:||||:..|..:|.|:.:..|.|.:..||.|.|.::|....:.|    :..:..:|.|
Zfish   478 S---TAEKPEYYQPADLCVGATVEVFGHRFVVTDADRFVLSFLESQSHQTP----EHTLSSLRHA 535

  Fly   566 VRP 568
            ..|
Zfish   536 TDP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921 46/109 (42%)
DM10_dom 231..368 CDD:461948 44/139 (32%)
DM10 440..547 CDD:128921 44/107 (41%)
efhc1NP_957261.1 DM10_dom 86..190 CDD:461948 46/108 (43%)
DM10_dom 233..352 CDD:461948 44/139 (32%)
DM10_dom 410..513 CDD:461948 43/106 (41%)

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