DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efhc1.2 and efhc1

DIOPT Version :9

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_957261.1 Gene:efhc1 / 393942 ZFINID:ZDB-GENE-040426-1300 Length:554 Species:Danio rerio


Alignment Length:588 Identity:201/588 - (34%)
Similarity:297/588 - (50%) Gaps:82/588 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GMPMLPGAQFYDRGKRRHPRQQTLMHYQGIQMLSDRREPELVEPNGIVADP--KCPPVPAQLNSL 68
            |:|.|||..|.|..|....|.|||....|   .:..|.|.:    ||..||  ......::.|.|
Zfish     8 GLPFLPGNTFRDLTKSAFHRAQTLDFKNG---YAQPRRPVV----GIGQDPLLSVNISHSERNQL 65

  Fly    69 WA--PKAT----------TKLPPWLAYDKQVLCFNAYFKENLTEIYHAPYQVRKVKIFFYLEDGT 121
            ..  |..|          ..:|...||||:||.|..||::.:...:...:::|.|..:::|||.:
Zfish    66 ITDIPNLTYGTDRSHLPLEFIPAHAAYDKKVLRFYGYFRQEVLHSWDEHFRIRPVVFYYHLEDDS 130

  Fly   122 MQVTEPKVENSGIPQGCLVHRQRIPKAPPTDREFISIF---DLNVDTDVQIFDRVYHISGCDVFT 183
            :.||||.|||||||||.|:.|||:.|.|..|     ::   ||||..|:.:|..||.|:.||.||
Zfish   131 ICVTEPPVENSGIPQGKLIKRQRLSKNPRGD-----LYHWKDLNVGMDINLFGEVYRITHCDPFT 190

  Fly   184 RQFLNRAGIFVPEAQQEPCDPTTEIRKRSGLKQTGNTATSALP--KKHAFAQFLEFDRRVLKFQG 246
            :.|:...||.:.|.:..|.||.|       .::..|..|...|  ..|...:||..||:||:|..
Zfish   191 QDFMESQGIVLNEFESIPSDPYT-------ARRAHNQQTHITPYDHNHQLERFLALDRQVLRFFA 248

  Fly   247 YWNDR-SEFGDVRKLEVCYYLADDTIDIKEKFPRNSGREGPTTFLKRGKLPKEFSGL--PLPGQQ 308
            .|:|. |.:|:.|.:.:.|||.||:::|.|....||||:.....|:|.|:||.....  |.|.  
Zfish   249 LWDDSDSLYGEKRPVTLHYYLVDDSVEICEHHEANSGRDPFPVLLRRQKIPKHIKPTCEPFPS-- 311

  Fly   309 TAMTLLNVLGNSMRDVRYVADPLNTGQKEVQHYTDQDLQIGAVLNVFGRSVVLTSCDQFTQSYYR 373
                  .||..|..||:             :::..||.::|..:|:.||..:|..||.||..||:
Zfish   312 ------CVLEVSPHDVK-------------EYFCPQDFRVGEEVNLMGRRFLLYDCDDFTHKYYQ 357

  Fly   374 EKYGIQEFSPQPIPERS--DIRPYTQGGMGSRRLPPYNGWGSHEDSEGNCITVEPKPPQADFKKL 436
            ..:......|..:..|:  ||:         |.:|||||:||.|||..||:::.|:||:.:..||
Zfish   358 HHHPDIPIKPFTVDTRTQQDIK---------RVIPPYNGFGSLEDSLQNCLSLIPQPPKKNVIKL 413

  Fly   437 FKYDGCILRFGAKLISA-IRDNGERDFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPG 500
            .:.|..:||:.|:|.|. ..|.|.| |::|:.||||.:.|:|.|.||||.:||:||::.|:|.||
Zfish   414 LENDHKVLRYAARLDSQNPLDEGRR-FILSFHLADDMISIFEKSTRNSGIIGGKFLEKTRIPKPG 477

  Fly   501 QDMYSSSRPEYYRANDFYIGRTMTLKDHIFHIVSADEFTLMYMEQHPSEFPVADIQKIMQKIREA 565
            .   ::.:||||:..|..:|.|:.:..|.|.:..||.|.|.::|....:.|    :..:..:|.|
Zfish   478 S---TAEKPEYYQPADLCVGATVEVFGHRFVVTDADRFVLSFLESQSHQTP----EHTLSSLRHA 535

  Fly   566 VRP 568
            ..|
Zfish   536 TDP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921 46/109 (42%)
DUF1126 112..144 CDD:284078 18/31 (58%)
DM10 238..376 CDD:128921 46/140 (33%)
DUF1126 262..294 CDD:284078 13/31 (42%)
DM10 440..547 CDD:128921 44/107 (41%)
DUF1126 463..495 CDD:284078 16/31 (52%)
efhc1NP_957261.1 DM10 93..198 CDD:128921 46/109 (42%)
DUF1126 121..153 CDD:284078 18/31 (58%)
DM10 240..356 CDD:128921 44/136 (32%)
DUF1126 264..297 CDD:284078 13/32 (41%)
DM10 417..521 CDD:128921 44/107 (41%)
DUF1126 440..472 CDD:284078 16/31 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56477
OrthoDB 1 1.010 - - D126718at33208
OrthoFinder 1 1.000 - - FOG0002682
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101134
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4447
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.760

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