DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Efhc1.2 and Efhc1.1

DIOPT Version :9

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_573075.1 Gene:Efhc1.1 / 32528 FlyBaseID:FBgn0030691 Length:793 Species:Drosophila melanogaster


Alignment Length:759 Identity:444/759 - (58%)
Similarity:578/759 - (76%) Gaps:13/759 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMRLPGMPMLPGAQFYDRGKRRHPRQQTLMHYQGIQMLSDRREPELVEPNGIVADPKCPPVPAQL 65
            |:|:||||:|||..|.|..|..:|:.|:|.:.||:.|||||::|..||...:..|..||||.|  
  Fly     1 MLRIPGMPLLPGTLFRDVSKGHYPKPQSLANVQGLSMLSDRQQPAPVESGSVTVDISCPPVGA-- 63

  Fly    66 NSLWAPKATTKLPPWLAYDKQVLCFNAYFKENLTEIYHAPYQVRKVKIFFYLEDGTMQVTEPKVE 130
            :|::.|::..::||||||||:||||:||||:.|.|:|||||.||||||::||||||:::.||:|:
  Fly    64 SSIYPPRSGPRMPPWLAYDKKVLCFHAYFKQTLQEVYHAPYLVRKVKIYYYLEDGTLEIYEPRVD 128

  Fly   131 NSGIPQGCLVHRQRIPKAPPTDREFISIFDLNVDTDVQIFDRVYHISGCDVFTRQFLNRAGIFVP 195
            ||||.|||:|||||:.||||.|.||:|:.|||||..||||||.|||:.||.|||.|||:.||.||
  Fly   129 NSGIVQGCVVHRQRVQKAPPCDNEFMSLIDLNVDQTVQIFDRQYHITDCDPFTRTFLNKRGITVP 193

  Fly   196 EAQQEPCDPTTEIRKRSGLKQTGNTATSALPKKHAFAQFLEFDRRVLKFQGYWNDRSEFGDVRKL 260
            :..:.|||||.|.|||....::||    .:||.|.|||||::||::||||.||:||:||||||||
  Fly   194 DPVKSPCDPTEEQRKRENQPRSGN----LIPKNHPFAQFLKYDRQILKFQAYWDDRTEFGDVRKL 254

  Fly   261 EVCYYLADDTIDIKEKFPRNSGREGPTTFLKRGKLPKEFSGLPLPGQQTAMTLLNVLGNSMRDVR 325
            |:||||:||||:|||:..|||||:|||.|||||:|.:||.||.||||.|.||||||||.:||:||
  Fly   255 ELCYYLSDDTIEIKEQHIRNSGRDGPTVFLKRGRLAREFEGLQLPGQMTPMTLLNVLGTNMRNVR 319

  Fly   326 YVADPLNTGQKEVQHYTDQDLQIGAVLNVFGRSVVLTSCDQFTQSYYREKYGIQEFSPQPIPERS 390
            |..||||||.||:.:|.::|||||:|:||:||:||:|..|.|||:|||::||||:|:|.|||.||
  Fly   320 YCVDPLNTGNKEIHYYREKDLQIGSVINVYGRAVVITELDPFTQNYYRQRYGIQDFTPLPIPARS 384

  Fly   391 DIRPYTQGGMGSRRLPPYNGWGSHEDSEGNCITVEPKPPQADFKKLFKYDGCILRFGAKLISAIR 455
            |   ........|:|||||||||:|||.||||:||||||::||||..|||..:||||||::|.|:
  Fly   385 D---DCADHRSERQLPPYNGWGSYEDSVGNCISVEPKPPKSDFKKFIKYDRYVLRFGAKMLSTIK 446

  Fly   456 DNGERDFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPGQDMYSSSRPEYYRANDFYIG 520
            .|.||.|||||:|.||||||.|.:.||||||||||:||.|:.||||:.:|..:|:||...:|::|
  Fly   447 ANCERIFVISYYLCDDTLQIQEIAVRNSGFLGGEFMKRTRLELPGQERFSCKQPQYYMPWNFFVG 511

  Fly   521 RTMTLKDHIFHIVSADEFTLMYMEQHPSEFPVADIQKIMQKIREAVRPDYKQFVLRCKPD-GDLG 584
            .||:|||.|||||||||:||||||.||..||.|::..||:|::.|::....:||..|.|| .||.
  Fly   512 STMSLKDFIFHIVSADEYTLMYMEHHPEIFPHANVGVIMEKVKSALQNRMAEFVGSCVPDCTDLE 576

  Fly   585 DY--TAVSFETLRSTLLSYLSKDCLLNHEIVTVCRFFSAEQAMPPSCDRNRVRAAAQLELKRALW 647
            ..  ..||||:.:..|:|.:... :.:|||:::||.||||::.|.:|||:.|||||.|||||.||
  Fly   577 KKRDVFVSFESFKGALISIMGNQ-ISDHEIISLCRHFSAEKSQPNACDRSTVRAAAHLELKRTLW 640

  Fly   648 NGMDQLNDHLSHINPACKPYISEGQVRSTLRGCRLPFSLELVEDILMVLQRNGQNEIEVRDFLAF 712
            |..|.|.:|..||||..:|::.|.:|||.||||||||||||:::||.:|.||..::|||.|.:.|
  Fly   641 NARDDLMEHFHHINPTNQPFLPEVKVRSALRGCRLPFSLELIDNILSILNRNECDDIEVCDLMNF 705

  Fly   713 FNMRNDQVPDIAPLNIAFELCPKLPFLHKGRLVDFTWFLDYLGI 756
            .::...:..|:.|:|.|||||||:|||:|||:|:||.||..|.:
  Fly   706 IDVSCGKGCDMLPVNHAFELCPKIPFLNKGRVVNFTCFLRELNL 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921 74/106 (70%)
DUF1126 112..144 CDD:284078 21/31 (68%)
DM10 238..376 CDD:128921 95/137 (69%)
DUF1126 262..294 CDD:284078 23/31 (74%)
DM10 440..547 CDD:128921 68/106 (64%)
DUF1126 463..495 CDD:284078 24/31 (77%)
Efhc1.1NP_573075.1 DM10 82..189 CDD:128921 74/106 (70%)
DUF1126 110..142 CDD:284078 21/31 (68%)
DM10 232..370 CDD:128921 95/137 (69%)
DUF1126 256..288 CDD:284078 23/31 (74%)
DM10 431..538 CDD:128921 68/106 (64%)
DUF1126 454..486 CDD:284078 24/31 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449358
Domainoid 1 1.000 125 1.000 Domainoid score I5412
eggNOG 1 0.900 - - E1_KOG0043
Homologene 1 1.000 - - H11863
Inparanoid 1 1.050 446 1.000 Inparanoid score I1608
Isobase 1 0.950 - 0 Normalized mean entropy S6773
OMA 1 1.010 - - QHG56477
OrthoDB 1 1.010 - - D126718at33208
OrthoFinder 1 1.000 - - FOG0002682
OrthoInspector 1 1.000 - - otm26521
orthoMCL 1 0.900 - - OOG6_101134
Panther 1 1.100 - - P PTHR12086
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4557
1413.760

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