DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efhc1.2 and Efhc2

DIOPT Version :10

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001100422.1 Gene:Efhc2 / 302507 RGDID:1563388 Length:750 Species:Rattus norvegicus


Alignment Length:784 Identity:261/784 - (33%)
Similarity:418/784 - (53%) Gaps:67/784 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MPMLPGAQF-YDRGKRRHPRQQTLMHYQGIQMLSDRREPELVEPNGIVADPKCPPVPAQ----LN 66
            :|:|||..| .:.||.:..|.|.......::||....:|      ||..|    .:|.|    .:
  Rat     3 LPLLPGNSFNRNIGKEKFHRSQHWGFCNNVRMLVSEDKP------GIGGD----LLPGQKIKPKH 57

  Fly    67 SLWAPKATTKLPPWLAYDKQVLCFNAYFKENLTEIYHAPYQVRKVKIFFYLEDGTMQVTEPKVEN 131
            |::.....|..|.|:|:|||||.|:||.::.:.:.....:::|..||:|||||.|:||.||:|.|
  Rat    58 SVFPKGDGTDAPSWVAFDKQVLSFDAYLEDEVPDKRQENFRIRYYKIYFYLEDDTIQVNEPEVIN 122

  Fly   132 SGIPQGCLVHRQRIPKAPPTDREFISIFDLNVDTDVQIFDRVYHISGCDVFTRQFLNRAGIFVPE 196
            ||:|||..:.|.|||..||.|.:|.:::|.|::..|..:.|.:.|..||.||:.||.:.||.:..
  Rat   123 SGLPQGTSIRRHRIPFPPPYDDQFYTVYDFNINISVVFYGRTFKIYDCDPFTKNFLRKIGIKLNP 187

  Fly   197 AQQEPCDPTTEIRKRSGLKQTGNTATSALPKK--HAFAQFLEFDRRVLKFQGYWND-RSEFGDVR 258
            ..|.|.||..::|     ::|........|.:  ....:||::|.:||:|...|:| .|.|||.|
  Rat   188 PGQRPFDPYMKMR-----RETLEFVDPFRPYQSFDTLKRFLQYDGKVLRFFCLWDDSASLFGDRR 247

  Fly   259 KLEVCYYLADDTIDIKEKFPRNSGREGPTTFLKRGKLPKEFS--GLPLPGQQTAMTLLNVLG--N 319
            :..:.|:|.||||:|:|..|.||||:..::||:|.|||| |.  |:..|||.|...:|||.|  :
  Rat   248 EFVLHYFLCDDTIEIREILPSNSGRDAMSSFLRRSKLPK-FGPPGIYQPGQITDRAVLNVYGGLS 311

  Fly   320 SMRDVRYVADPLNTGQKEVQHYTDQDLQIGAVLNVFGRSVVLTSCDQFTQSYYREKYGIQEFS-- 382
            ..|...|:.|....|:.|...||||||.|||.:||:||.|:|..||:||::||:.|||:..|:  
  Rat   312 EWRADGYLLDKYQLGKIEQDFYTDQDLSIGATINVWGRKVLLCDCDEFTKTYYKTKYGVDNFTPI 376

  Fly   383 ---PQPIPERSDIRPYTQGGMGSRRLPPYNGWGSHEDSEGNCITVEPKPPQADFKKLFKYDGC-- 442
               |.|:|:.            .|:.|||.|:||.|||..:|::::|.|.:.:|:|..:.|..  
  Rat   377 SCKPPPLPKI------------KRKYPPYTGFGSEEDSFRSCVSLKPTPHRKNFRKFMELDSFGN 429

  Fly   443 ---ILRFGAKLISAIRDNGERDFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPGQDMY 504
               |||:.||||:....:.:|.|||:::|:|||:.::|...||||..||.||||:||..|||:::
  Rat   430 VSNILRYFAKLITHKCADVDRMFVIAFYLSDDTISVFEPIERNSGNAGGMFLKRSRVKKPGQEVF 494

  Fly   505 SSSRPEYYRANDFYIGRTMTLKDHIFHIVSADEFTLMYMEQHPSEFPVADIQKIMQKIREAVRPD 569
            .|...||.:|.:.|||.|:.:..::|.:::|||:||.|||.:...||.::.:..:||::.  ...
  Rat   495 KSEFSEYVKAEELYIGATVNINGYLFLLLNADEYTLNYMESNTDRFPYSNFELAIQKLKH--EKS 557

  Fly   570 YKQFVLRCKPDGDLGDYTAVSFETLRSTLLSYLSKDCLLNHEIVTVCRFFSAEQAMPPSCDRNRV 634
            ..:.:.:.....|......|.:...|..|:| ::...|::.|::|:.|.:...:.|.|  |...:
  Rat   558 KSREITQVFAAADYNHTKVVPYNAFRDILMS-ITMGNLIDQELITIARHYRVPEVMDP--DLAYL 619

  Fly   635 RAAAQLELKRALWNGMDQLNDHLSHINPACKPYISEGQVRSTLRGCRLPFSLELVEDILMVLQRN 699
            .|.|..:.|:.::...|....:..:.:...|..:....::...:..|||.|.:.::.:|...:..
  Rat   620 IAQAHEKFKKNMFENFDMFIYNCVYEDRERKGVLPTTDIKRMCKSSRLPLSDDFLDCLLSRFEDK 684

  Fly   700 GQNEIEVRDFLAFFNMRNDQVPDIAPLNIAFELC--------PKLPFLHKGRLVDFTWFLDYLGI 756
            .| :|....|.:..|.|.:..||:.......|.|        ..:|..:. |.:||  .:|..|:
  Rat   685 DQ-QINYEIFFSLLNWRMNPTPDLQAPPYLKEKCEDVWVGMPSPIPVRYV-RYLDF--LMDVYGL 745

  Fly   757 EEEL 760
            ||.:
  Rat   746 EENM 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921 47/106 (44%)
DM10_dom 231..368 CDD:461948 65/141 (46%)
DM10 440..547 CDD:128921 49/111 (44%)
Efhc2NP_001100422.1 DM10 75..182 CDD:128921 47/106 (44%)
DM10_dom 219..360 CDD:461948 65/141 (46%)
DM10_dom 418..529 CDD:461948 46/110 (42%)

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