DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efhc1.2 and CG33489

DIOPT Version :9

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_001261715.1 Gene:CG33489 / 2768971 FlyBaseID:FBgn0053489 Length:497 Species:Drosophila melanogaster


Alignment Length:450 Identity:92/450 - (20%)
Similarity:141/450 - (31%) Gaps:163/450 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 RVLKFQGYWNDRSEFGDVRKLEVCYYLADDTIDIKEKFPRNSGREGPTTFLKRGK----LPKEFS 300
            |......:.:|:..|.|      |..:|..:.:|:.:......|..|..|   ||    ||:...
  Fly    15 RAAGLPSFGDDKISFKD------CVIIAHPSEEIRHQLELECRRNKPQPF---GKLSPILPESKM 70

  Fly   301 G--LPLPGQQTAMTLLNVLGNSMRDVRYVADPL----NTGQKEVQHYTDQDLQIGAVLNVFGR-- 357
            |  |...||::.:.:..        .:::.|..    .|||.:..|....|:...:  :.|||  
  Fly    71 GELLSSEGQKSRVAVFK--------EKFLEDMYCKFGKTGQIQPTHSKPDDVTNWS--HTFGRAN 125

  Fly   358 -------SVVL--TSCDQFTQSYYREKYG-----IQEFSPQPIPERSDIRPYTQGGMGSRRLPPY 408
                   |.::  .|.||..:.|.....|     ...|..:.|..|.| :|:.       ||..|
  Fly   126 PPAETLYSTIMPKKSADQVNREYAEFHRGHIVSNNHYFPSEQINRRYD-KPFD-------RLNTY 182

  Fly   409 NGWGSHEDSEG---NC-------ITVEPKPPQADF---------KKLFKY--------------- 439
            ......|.|..   .|       :||..| |..|:         ||..||               
  Fly   183 GVLQGAEHSGSTMKKCLMQGDEHLTVVSK-PWMDYVQKTKAPLGKKYEKYLDKVPDVFFGYRPHT 246

  Fly   440 DGCILRFGAKLISAIRDNGERDFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPGQDMY 504
            |.|.:|.   |:..||. .|.|                    ||..:...:|.|.|..|      
  Fly   247 DKCTIRM---LLEDIRP-CEED--------------------NSLVMALSYLNRLRESL------ 281

  Fly   505 SSSRPEYYRANDFYIGRTMTLKDHIFHIVSADEFTLMYMEQHPSEFPVADIQKIMQKIREAVRPD 569
                   ::.||||      :.|.|..:...|       ::|....|::.|...|.|:.  :|.|
  Fly   282 -------HKRNDFY------MMDLIASLERED-------KEHTGHMPLSQILGTMYKLH--IRVD 324

  Fly   570 YKQFVLRCKPDGDLGDYTAVSFETLRSTLLSYLSKDC---LLNHEIVTVCRFFSAEQAMP 626
                              |....|:.|.....|.:.|   .:|::  ..||..|.:|.:|
  Fly   325 ------------------AAKIRTMLSHFGKILDEGCPTERVNYD--HFCRILSVQQPLP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921
DUF1126 112..144 CDD:284078
DM10 238..376 CDD:128921 32/156 (21%)
DUF1126 262..294 CDD:284078 6/31 (19%)
DM10 440..547 CDD:128921 21/106 (20%)
DUF1126 463..495 CDD:284078 4/31 (13%)
CG33489NP_001261715.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12086
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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