DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efhc1.2 and efhc-1

DIOPT Version :9

Sequence 1:NP_611459.1 Gene:Efhc1.2 / 37284 FlyBaseID:FBgn0034487 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_509738.2 Gene:efhc-1 / 190059 WormBaseID:WBGene00013028 Length:447 Species:Caenorhabditis elegans


Alignment Length:544 Identity:135/544 - (24%)
Similarity:218/544 - (40%) Gaps:133/544 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PRQQTLMHYQGIQMLSDRREPELVEPNGIVADPKC-PPVPAQLNSLWAPKATT-----KLPPWL- 81
            |.:..|.|: |......||..:|...||     :| .||...:::.  ||..:     ...|.| 
 Worm    14 PTEDILEHF-GSDPTPVRRRQQLKYKNG-----ECFVPVETIVDNY--PKQRSFHHYCNAGPLLH 70

  Fly    82 ---AYDKQVLCFNAYFKEN-LTEIYHAPYQVRKVKIFFYLEDGTMQVTEPKVENSGIPQGCLVHR 142
               |.:..||.|:||.:|: |.|..|   ::|..||.::|.|.|:.|.||.|:|:|...|.:..|
 Worm    71 EAEAANSAVLSFDAYAEEDGLDEEIH---RIRIFKINYHLNDDTITVNEPFVDNTGYLHGRIFRR 132

  Fly   143 QRIPKAPPTDREFISIFDLNVDTDVQIFDRVYHISGCDVFTRQFLNRAGIFVPEAQQEPCDPTTE 207
            |::|......:.::...||||.||:.:|..:|.|:.||.|||.||...|..|.|.::.|.||.  
 Worm   133 QKVPAHNRIGKPYVHWSDLNVGTDINLFQTIYRITSCDTFTRSFLEEHGTKVNEDEELPEDPW-- 195

  Fly   208 IRKRSGLKQTGNTATSALPKKHAFAQFLEFDRR--VLKFQGYWNDR-SEFGDVRK---LEVCYYL 266
            :.:|.|..:|    ...||.:.      ||..|  :|.::..|.|. ::|...|.   .::..|.
 Worm   196 LVRRRGAPRT----APKLPDQR------EFINRPPMLVYRCCWLDHMNDFHGCRMKRIFKMYVYC 250

  Fly   267 ADDTIDIKEKFPRNSGREGPTTFLKRGKLPKEFSGLPLPGQQTAMTLLNVLGNSMRDVRYVADPL 331
            :|.|:.:.|:.....|:    .||||       ..||.|.|...:         .||.|:     
 Worm   251 SDHTVALIEETKEFEGQ----LFLKR-------IALPFPVQPDMV---------KRDYRW----- 290

  Fly   332 NTGQKEVQHYTDQDLQIGAVLNVFGRSVVLTSC-DQFTQSYYREKYGIQEFSPQPIPERSDIRPY 395
                        .|::.|..::||.|.:.:..| :..|:|:.|:::|..:|:             
 Worm   291 ------------WDIRPGVWVDVFCRPMFVFECANDETKSFTRQQFGETDFA------------- 330

  Fly   396 TQGGMGSRRLPPYNGWGSHEDSEGNCITVEPKPPQADFKKLFKYDGCILRFGAKLISAIRDNGER 460
                          .:.|....||        ||...|..    ...||:|...::.|.......
 Worm   331 --------------NYSSQILEEG--------PPTTQFFN----SPSILKFRCTMVDAPSVLYGL 369

  Fly   461 DFVISYFLADDTLQIYETSRRNSGFLGGEFLKRARVPLPGQDMYSSSRPEYYRANDFYIGRTMTL 525
            .|::.|.:....:.|.|..|: :...|..|||         |:.:|:    :..|.|..||.:..
 Worm   370 HFLLYYDVNRRIVNINEEGRK-TWTDGRVFLK---------DVDAST----FSENQFAPGRILQF 420

  Fly   526 KDHIFHIVSADEFTLMYM--EQHP 547
            ....|::|.:...|..|:  :|.|
 Worm   421 FKWRFNLVQSSGETGKYLRWKQTP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efhc1.2NP_611459.1 DM10 84..191 CDD:128921 41/107 (38%)
DUF1126 112..144 CDD:284078 13/31 (42%)
DM10 238..376 CDD:128921 31/144 (22%)
DUF1126 262..294 CDD:284078 9/31 (29%)
DM10 440..547 CDD:128921 24/108 (22%)
DUF1126 463..495 CDD:284078 8/31 (26%)
efhc-1NP_509738.2 DM10 76..181 CDD:128921 41/107 (38%)
DUF1126 102..134 CDD:284078 13/31 (42%)
DM10 222..326 CDD:128921 30/140 (21%)
PLPDE_III <309..>370 CDD:294187 16/99 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I6151
eggNOG 1 0.900 - - E1_KOG0043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56477
OrthoDB 1 1.010 - - D126718at33208
OrthoFinder 1 1.000 - - FOG0002682
OrthoInspector 1 1.000 - - otm14728
orthoMCL 1 0.900 - - OOG6_101134
Panther 1 1.100 - - LDO PTHR12086
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4447
SonicParanoid 1 1.000 - - X4557
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.860

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