DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and TMM

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_178125.1 Gene:TMM / 844348 AraportID:AT1G80080 Length:496 Species:Arabidopsis thaliana


Alignment Length:295 Identity:68/295 - (23%)
Similarity:110/295 - (37%) Gaps:73/295 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LYEDLEEVYLKEN-FISVIPKWLLNITTLKFIHLAGNNLS-ELPVDIYMLENLEFLDVSNNELK- 83
            |...|:.:.|:|| |:..||..|.|:|.||.:.|..|:|: .:|:.......|..||:|.|.|. 
plant   157 LGSSLQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTG 221

  Fly    84 ----------------------ELPPTLGLLLNLQQLNVSGNQLT-ELPVELSGLRNLEHLNIGK 125
                                  .:||||....:|.::::|.|::| .:|..::.|..|..|::..
plant   222 SIPGFVLPALSVLDLNQNLLTGPVPPTLTSCGSLIKIDLSRNRVTGPIPESINRLNQLVLLDLSY 286

  Fly   126 NQFR-RLPVQLSECVRLNELNVSDNEAL-VHIPER----ISNLPMLQSLAADRCALVYLPAALSK 184
            |:.. ..|..|.....|..|.:..|... ..|||.    :.||.:|  :.::......:|.:|::
plant   287 NRLSGPFPSSLQGLNSLQALMLKGNTKFSTTIPENAFKGLKNLMIL--VLSNTNIQGSIPKSLTR 349

  Fly   185 FMNHVRIFH---NTAINYIPMVYE---------------------------------RFYQN--F 211
             :|.:|:.|   |.....||:.:.                                 |.|.|  .
plant   350 -LNSLRVLHLEGNNLTGEIPLEFRDVKHLSELRLNDNSLTGPVPFERDTVWRMRRKLRLYNNAGL 413

  Fly   212 YDNRQRNTPVAVHRKGLFWVRELETSTRLLLPVGT 246
            ..||..:...|...|....||..:..|....|.||
plant   414 CVNRDSDLDDAFGSKSGSTVRLCDAETSRPAPSGT 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380 1/2 (50%)
LRR_8 26..82 CDD:290566 21/57 (37%)
leucine-rich repeat 26..48 CDD:275380 9/22 (41%)
LRR <43..>194 CDD:227223 44/184 (24%)
LRR_4 47..87 CDD:289563 13/63 (21%)
leucine-rich repeat 49..71 CDD:275380 6/22 (27%)
leucine-rich repeat 72..95 CDD:275380 10/45 (22%)
leucine-rich repeat 96..117 CDD:275380 5/21 (24%)
leucine-rich repeat 118..140 CDD:275380 5/22 (23%)
leucine-rich repeat 141..164 CDD:275380 8/27 (30%)
TMMNP_178125.1 PLN00113 150..>392 CDD:215061 55/237 (23%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..208 CDD:275380 6/22 (27%)
leucine-rich repeat 209..230 CDD:275380 6/20 (30%)
leucine-rich repeat 231..254 CDD:275380 4/22 (18%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..302 CDD:275380 5/22 (23%)
leucine-rich repeat 303..328 CDD:275380 6/24 (25%)
leucine-rich repeat 329..352 CDD:275380 4/25 (16%)
leucine-rich repeat 353..373 CDD:275380 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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