DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and RLP16

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001321481.1 Gene:RLP16 / 843760 AraportID:AT1G74200 Length:302 Species:Arabidopsis thaliana


Alignment Length:131 Identity:38/131 - (29%)
Similarity:64/131 - (48%) Gaps:11/131 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DVPMDLFLYEDLEEVYLKENFIS-VIPKWLLNITTLKFIHLAGNNLSELPVDIYMLENLEFLDVS 78
            :||:.||....|:.:.|..|.:| .:|:.:.....||.:.|..||||.:..|..:.:|:..||:.
plant   132 EVPISLFNMSSLQLLALSANSLSGDLPQAISGYGALKVLLLRDNNLSGVIPDTLLGKNIIVLDLR 196

  Fly    79 NNELKELPPTLGLLLNLQQLNV---SGNQLT-ELPVELSGLRNLEHLNIGKNQFRRLPVQLSECV 139
            ||.|....|.   .:|.|.:.:   .||.|| .:|..|..:|::..|::..|   :|...:..|:
plant   197 NNRLSGNIPE---FINTQYIRILLLRGNNLTGSIPRRLCAVRSIHLLDLANN---KLNGSIPSCL 255

  Fly   140 R 140
            |
plant   256 R 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380 4/9 (44%)
LRR_8 26..82 CDD:290566 18/56 (32%)
leucine-rich repeat 26..48 CDD:275380 5/22 (23%)
LRR <43..>194 CDD:227223 29/102 (28%)
LRR_4 47..87 CDD:289563 14/39 (36%)
leucine-rich repeat 49..71 CDD:275380 8/21 (38%)
leucine-rich repeat 72..95 CDD:275380 6/22 (27%)
leucine-rich repeat 96..117 CDD:275380 7/24 (29%)
leucine-rich repeat 118..140 CDD:275380 4/21 (19%)
leucine-rich repeat 141..164 CDD:275380 38/131 (29%)
RLP16NP_001321481.1 leucine-rich repeat 2..21 CDD:275380
PLN00113 12..>255 CDD:331614 36/128 (28%)
leucine-rich repeat 25..46 CDD:275380
leucine-rich repeat 47..70 CDD:275380
leucine-rich repeat 71..94 CDD:275380
leucine-rich repeat 95..118 CDD:275380
leucine-rich repeat 119..142 CDD:275380 4/9 (44%)
leucine-rich repeat 143..166 CDD:275380 5/22 (23%)
leucine-rich repeat 167..189 CDD:275380 8/21 (38%)
leucine-rich repeat 190..212 CDD:275380 7/24 (29%)
leucine-rich repeat 213..236 CDD:275380 6/22 (27%)
leucine-rich repeat 237..257 CDD:275380 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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