DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and AT5G49750

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_199786.2 Gene:AT5G49750 / 835038 AraportID:AT5G49750 Length:493 Species:Arabidopsis thaliana


Alignment Length:227 Identity:55/227 - (24%)
Similarity:97/227 - (42%) Gaps:31/227 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NKTILHWSYLNFK---DVPMDLFLYEDLEEVYLKENFIS-VIPKWLLNITTLKFIHLAGNNLSEL 62
            |.:::|..:.|.:   .:|..|.|...|..:.|..|.:| .||..|.|:|:|..:||..|..:..
plant   274 NMSLIHVLFNNNQFTGKIPESLSLVTTLLVLRLDTNRLSGDIPPSLNNLTSLNQLHLCNNKFTGS 338

  Fly    63 PVDIYMLENLEFLDVSNN--ELKELPPTLGLLLNLQQLNVSGNQLT-ELPVELSGLRNLEHLNI- 123
            ..::..|.:|:.:|||||  |...:|..:..|.||..:.:.|.||. .:|:....|..|:.:|: 
plant   339 LPNLASLTDLDEIDVSNNTLEFSLVPSWIVSLRNLTSIRMEGIQLIGPVPISFFSLIRLQSVNLK 403

  Fly   124 ----------GKNQFRRLPVQLSECVRLNELNVSDNEALVHIPERISNLPMLQSLAADRCALVYL 178
                      |.|..::|.:   ..:|.|.:......|..||...::|.|:        |..|..
plant   404 RNWINGTLDFGTNYSKQLEL---VSLRYNNITGYKQAANEHIKVILANNPV--------CGEVGN 457

  Fly   179 PAALSKFMNHVRIFHNTAINYIPMVYERFYQN 210
            ..:....:.|...|  :.:..|..::::|..|
plant   458 KPSFCSAIKHSSSF--STLQTIKDLFKKFIYN 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380 5/23 (22%)
LRR_8 26..82 CDD:290566 20/58 (34%)
leucine-rich repeat 26..48 CDD:275380 8/22 (36%)
LRR <43..>194 CDD:227223 40/164 (24%)
LRR_4 47..87 CDD:289563 13/41 (32%)
leucine-rich repeat 49..71 CDD:275380 5/21 (24%)
leucine-rich repeat 72..95 CDD:275380 9/24 (38%)
leucine-rich repeat 96..117 CDD:275380 5/21 (24%)
leucine-rich repeat 118..140 CDD:275380 5/32 (16%)
leucine-rich repeat 141..164 CDD:275380 5/22 (23%)
AT5G49750NP_199786.2 PLN00113 113..>466 CDD:215061 50/202 (25%)
leucine-rich repeat 148..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
leucine-rich repeat 197..220 CDD:275380
leucine-rich repeat 221..251 CDD:275380
leucine-rich repeat 252..276 CDD:275380 1/1 (100%)
leucine-rich repeat 277..300 CDD:275380 5/22 (23%)
leucine-rich repeat 301..324 CDD:275380 8/22 (36%)
leucine-rich repeat 325..347 CDD:275380 5/21 (24%)
leucine-rich repeat 348..372 CDD:275380 9/23 (39%)
leucine-rich repeat 373..394 CDD:275380 5/20 (25%)
leucine-rich repeat 397..420 CDD:275380 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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