DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and PGIP1

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_196304.1 Gene:PGIP1 / 830577 AraportID:AT5G06860 Length:330 Species:Arabidopsis thaliana


Alignment Length:123 Identity:38/123 - (30%)
Similarity:58/123 - (47%) Gaps:8/123 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ITTLKFIHLAGNNLSELPV---DIYMLENLEFLDVSNNELKELPPTLGLLLNLQQLNVSGNQLT- 106
            :|.|..  .:|....::|.   |:..||.|.|..:| |....:.||:..|.||:.|.:|...|| 
plant    72 VTALTI--FSGQISGQIPAEVGDLPYLETLVFRKLS-NLTGTIQPTIAKLKNLRMLRLSWTNLTG 133

  Fly   107 ELPVELSGLRNLEHLNIGKNQFR-RLPVQLSECVRLNELNVSDNEALVHIPERISNLP 163
            .:|..:|.|:|||.|.:..|... .:|..||...::..|.:|.|:....|||...:.|
plant   134 PIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFP 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380
LRR_8 26..82 CDD:290566 11/38 (29%)
leucine-rich repeat 26..48 CDD:275380 0/1 (0%)
LRR <43..>194 CDD:227223 38/123 (31%)
LRR_4 47..87 CDD:289563 11/42 (26%)
leucine-rich repeat 49..71 CDD:275380 5/24 (21%)
leucine-rich repeat 72..95 CDD:275380 7/22 (32%)
leucine-rich repeat 96..117 CDD:275380 7/21 (33%)
leucine-rich repeat 118..140 CDD:275380 7/22 (32%)
leucine-rich repeat 141..164 CDD:275380 7/23 (30%)
PGIP1NP_196304.1 LRRNT_2 26..63 CDD:285463
LRR_8 119..179 CDD:290566 20/59 (34%)
leucine-rich repeat 121..144 CDD:275380 8/22 (36%)
leucine-rich repeat 145..168 CDD:275380 7/22 (32%)
leucine-rich repeat 169..193 CDD:275380 7/23 (30%)
leucine-rich repeat 194..216 CDD:275380
leucine-rich repeat 217..240 CDD:275380
leucine-rich repeat 241..262 CDD:275380
leucine-rich repeat 264..285 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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