DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and AT4G03010

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_192210.1 Gene:AT4G03010 / 828113 AraportID:AT4G03010 Length:395 Species:Arabidopsis thaliana


Alignment Length:230 Identity:58/230 - (25%)
Similarity:98/230 - (42%) Gaps:65/230 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IPKWLLNITTLKFIHLAGNNLS-ELPVDIYMLENLEFLDVSNNELK-ELPPTLGLL--------- 92
            :|..:.....|:|:.::.|.:| |:|..:..|..|:.||:|.|:|. .:||::|.|         
plant   113 LPHTISQSKNLRFLAISRNFISGEIPASLSELRGLKTLDLSYNQLTGSIPPSIGSLPELSNLILC 177

  Fly    93 ---LN----------LQQLNVSGNQLTELPVELSGL-RNLEHLNIGKNQ-----FRRLPVQLSEC 138
               ||          |.::::..|.||.: :.|:.| .:|::|::..||     :|.|       
plant   178 HNHLNGSIPQFLSQSLTRIDLKRNNLTGI-ISLTSLPPSLQYLSLAWNQLTGPVYRVL------- 234

  Fly   139 VRLNELNVSD---NEALVHIPERISNLPMLQSLAADRCALVYLPAALSKFMNHVRIFHNTAINYI 200
            :|||:||..|   |.....||.:|...| :.:|...|          :.|...::..:...|..:
plant   235 LRLNQLNYLDLSLNRFTGAIPGQIFTFP-ITNLQLQR----------NFFYGVIQPPNQVTIPTV 288

  Fly   201 PMVYERF----------YQNFYDNRQRNT---PVA 222
            .:.|.||          .||.|.|..|.|   ||:
plant   289 DLSYNRFSGELSPLLSNVQNLYLNNNRFTGQVPVS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380
LRR_8 26..82 CDD:290566 13/43 (30%)
leucine-rich repeat 26..48 CDD:275380 1/8 (13%)
LRR <43..>194 CDD:227223 45/183 (25%)
LRR_4 47..87 CDD:289563 13/41 (32%)
leucine-rich repeat 49..71 CDD:275380 7/22 (32%)
leucine-rich repeat 72..95 CDD:275380 12/45 (27%)
leucine-rich repeat 96..117 CDD:275380 5/21 (24%)
leucine-rich repeat 118..140 CDD:275380 6/26 (23%)
leucine-rich repeat 141..164 CDD:275380 9/25 (36%)
AT4G03010NP_192210.1 LRRNT_2 28..66 CDD:285463
leucine-rich repeat 99..120 CDD:275380 1/6 (17%)
LRR_8 121..181 CDD:290566 17/59 (29%)
LRR_RI <122..259 CDD:238064 40/144 (28%)
leucine-rich repeat 123..146 CDD:275380 7/22 (32%)
leucine-rich repeat 147..170 CDD:275380 10/22 (45%)
leucine-rich repeat 171..195 CDD:275380 3/23 (13%)
LRR_8 192..250 CDD:290566 19/65 (29%)
leucine-rich repeat 216..239 CDD:275380 8/29 (28%)
leucine-rich repeat 240..265 CDD:275380 8/25 (32%)
leucine-rich repeat 266..305 CDD:275380 7/48 (15%)
leucine-rich repeat 306..332 CDD:275380 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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