DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and SHOC2

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001311265.1 Gene:SHOC2 / 8036 HGNCID:15454 Length:582 Species:Homo sapiens


Alignment Length:334 Identity:86/334 - (25%)
Similarity:149/334 - (44%) Gaps:61/334 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KDVPMDLFLYEDLEEVYLKENFISVIPKWLLNITTLKFIHLAGNNLSELPVDIYMLENLEFLDVS 78
            :::|..::..:.|..:||:.|.|:.:.|.:.|::.|..:.:..|.:.:||.:|..|.||..|||:
Human   182 REIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVA 246

  Fly    79 NNELKELPPTLGLLLNLQQLNVSGNQLTELPVELSGLRNLEHLNIGKNQFRRLPVQLSECVRLNE 143
            :|:|:.||..:|....:..|::..|:|.:||..:..|.:|..|.:..|:...:|..|::|..|.|
Human   247 HNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEE 311

  Fly   144 LNVSDNEALVHIPER-ISNLPMLQSLA-ADRCALVYLPAALSKF--MNHVRIFHNTAINYIPM-V 203
            ||:.:|. :..:||. :|:|..|.||. |..|..:|.....|:|  :..:.:.|| .||.||. :
Human   312 LNLENNN-ISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHN-RINKIPFGI 374

  Fly   204 YER----FYQNFYDNRQRNTP-------------VAVHR--------KGLFWVRELETSTRLL-- 241
            :.|    ...|..||:..:.|             :|.::        .||..:..|..|..||  
Human   375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK 439

  Fly   242 LPVGTRTV----------FPVPSVENRVSLYDDCLHALQTLNRFTP---------------VYEN 281
            ||.|...:          ..:.|:.|.::...|....:.|.|:.|.               :.||
Human   440 LPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 504

  Fly   282 VAMHRLLPE 290
            :..|  |||
Human   505 LLTH--LPE 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380 1/10 (10%)
LRR_8 26..82 CDD:290566 19/55 (35%)
leucine-rich repeat 26..48 CDD:275380 7/21 (33%)
LRR <43..>194 CDD:227223 46/154 (30%)
LRR_4 47..87 CDD:289563 14/39 (36%)
leucine-rich repeat 49..71 CDD:275380 6/21 (29%)
leucine-rich repeat 72..95 CDD:275380 9/22 (41%)
leucine-rich repeat 96..117 CDD:275380 6/20 (30%)
leucine-rich repeat 118..140 CDD:275380 6/21 (29%)
leucine-rich repeat 141..164 CDD:275380 9/23 (39%)
SHOC2NP_001311265.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..88
LRR 1 101..122
leucine-rich repeat 104..124 CDD:275380
PLN00113 <115..>483 CDD:215061 79/302 (26%)
LRR 2 124..145
leucine-rich repeat 125..147 CDD:275380
LRR 3 147..169
leucine-rich repeat 148..170 CDD:275380
LRR 4 170..191 1/8 (13%)
leucine-rich repeat 171..193 CDD:275380 1/10 (10%)
LRR 5 193..214 6/20 (30%)
leucine-rich repeat 194..216 CDD:275380 7/21 (33%)
LRR 6 216..237 5/20 (25%)
leucine-rich repeat 217..239 CDD:275380 6/21 (29%)
LRR 7 239..260 10/20 (50%)
leucine-rich repeat 240..262 CDD:275380 9/21 (43%)
LRR 8 262..283 5/20 (25%)
leucine-rich repeat 263..285 CDD:275380 6/21 (29%)
LRR 9 285..307 5/21 (24%)
leucine-rich repeat 286..332 CDD:275380 15/46 (33%)
LRR 10 308..329 7/21 (33%)
LRR 11 332..353 6/20 (30%)
leucine-rich repeat 333..380 CDD:275380 15/47 (32%)
LRR 12 356..377 6/21 (29%)
LRR 13 380..400 4/19 (21%)
leucine-rich repeat 381..403 CDD:275380 4/21 (19%)
LRR 14 403..424 1/20 (5%)
leucine-rich repeat 404..426 CDD:275380 3/21 (14%)
LRR 15 426..448 7/21 (33%)
leucine-rich repeat 427..449 CDD:275380 7/21 (33%)
LRR 16 449..470 2/20 (10%)
leucine-rich repeat 450..472 CDD:275380 2/21 (10%)
PLN03150 <453..527 CDD:178695 12/61 (20%)
LRR 17 472..494 4/21 (19%)
leucine-rich repeat 473..495 CDD:275380 3/21 (14%)
LRR 18 495..516 6/19 (32%)
leucine-rich repeat 496..519 CDD:275380 6/18 (33%)
LRR 19 518..540
LRR 20 542..563
leucine-rich repeat 543..563 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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