DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and LRRC18

DIOPT Version :10

Sequence 1:NP_611457.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001006940.3 Gene:LRRC18 / 474354 HGNCID:23199 Length:261 Species:Homo sapiens


Alignment Length:219 Identity:67/219 - (30%)
Similarity:110/219 - (50%) Gaps:19/219 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YEDLEEVYLKENFISVIPKWLLNITTLKFIHLAGNNLSELPVDIYMLENLEFLDVSNNELKELPP 87
            ::..:.:.|.:..|:..||.:|.::.:..:.|:.|.:.::|..|...:||.:||:.:|.:.:||.
Human    26 FDGKKRLDLSKMGITTFPKCILRLSDMDELDLSRNLIRKIPDSISKFQNLRWLDLHSNYIDKLPE 90

  Fly    88 TLGLLLNLQQLNVSGNQLTE--LPVELSGLRNLEHLNIGKNQFRRLPVQLSECVRLNELNVSDNE 150
            ::|.:.:|..||||.|:||.  |||||..|:|:..:|:|.|....:|..|.....|:|:.:.|| 
Human    91 SIGQMTSLLYLNVSNNRLTSNGLPVELKQLKNIRAVNLGLNHLDSVPTTLGALKELHEVGLHDN- 154

  Fly   151 ALVHIPERISNLPMLQSLAADRCALVYLPAALSKFMNHVRIFHNTAINYIPMVYE--------RF 207
            .|.:||..||.||.|:.|...|.... .|.....|::.:|...|     :.:|.|        |.
Human   155 LLNNIPVSISKLPKLKKLNIKRNPFP-KPGESEIFIDSIRRLEN-----LYVVEEKDLCAACLRK 213

  Fly   208 YQNFYD--NRQRNTPVAVHRKGLF 229
            .||..|  ||.:|......||.:|
Human   214 CQNARDNLNRIKNMATTTPRKTIF 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_611457.1 leucine-rich repeat 4..25 CDD:275380 0/1 (0%)
LRR <19..>179 CDD:443914 51/157 (32%)
leucine-rich repeat 26..48 CDD:275380 5/21 (24%)
leucine-rich repeat 49..71 CDD:275380 4/21 (19%)
leucine-rich repeat 72..95 CDD:275380 7/22 (32%)
leucine-rich repeat 96..117 CDD:275380 13/22 (59%)
leucine-rich repeat 118..140 CDD:275380 5/21 (24%)
leucine-rich repeat 141..164 CDD:275380 10/22 (45%)
LRRC18NP_001006940.3 LRR 1 28..49 5/20 (25%)
LRR <30..>179 CDD:443914 51/149 (34%)
leucine-rich repeat 30..51 CDD:275380 5/20 (25%)
LRR 2 51..72 4/20 (20%)
leucine-rich repeat 52..74 CDD:275380 4/21 (19%)
LRR 3 74..95 8/20 (40%)
leucine-rich repeat 75..97 CDD:275380 7/21 (33%)
LRR 4 97..118 12/20 (60%)
leucine-rich repeat 98..122 CDD:275380 14/23 (61%)
LRR 5 122..144 6/21 (29%)
leucine-rich repeat 123..145 CDD:275380 5/21 (24%)
LRR 6 145..167 9/22 (41%)
leucine-rich repeat 146..168 CDD:275380 10/22 (45%)
LRR 7 168..189 4/21 (19%)

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