DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11099 and lrrc57

DIOPT Version :9

Sequence 1:NP_001286627.1 Gene:CG11099 / 37282 FlyBaseID:FBgn0034485 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001002627.1 Gene:lrrc57 / 436900 ZFINID:ZDB-GENE-040718-372 Length:238 Species:Danio rerio


Alignment Length:162 Identity:56/162 - (34%)
Similarity:95/162 - (58%) Gaps:3/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DVPMDL-FLYEDLEEVYLKENFISVIPKWLLNITTLKFIHLAGNNLSELPVDIYMLENLEFLDVS 78
            :.|.|| .|..:|..|.|..|.|..:|.::.:...||...::.|.|:.||.||..|:.||.|.::
Zfish    28 EFPEDLQKL
TANLRTVDLSNNKIEELPAFIGSFQHLKSFTISCNKLTSLPNDIGKLKKLETLILN 92

  Fly    79 NNELKELPPTLGLLLNLQQLNVSGNQLTELPVELSGLRNLEHLNIGKNQFRRLPVQLSECVRLNE 143
            .|:||:||.::|.|.:|:.|::||||..|.|..|..||.|:.|::.|||.|.:|.:::| ::..|
Zfish    93 GNQLKQLPSSIGQLKSLRTLSLSGNQFKEFPSGLGTLRQLDVLDLSKNQIRVVPAEVAE-LQAIE 156

  Fly   144 LNVSDNEALVHIPERISNLPMLQSLAADRCAL 175
            :|::.|: :..:.:.:|..|.|:.|..:...|
Zfish   157 INLNQNQ-ISSVTQEVSRTPRLKVLRLEENCL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11099NP_001286627.1 leucine-rich repeat 4..25 CDD:275380 4/10 (40%)
LRR_8 26..82 CDD:290566 19/55 (35%)
leucine-rich repeat 26..48 CDD:275380 6/21 (29%)
LRR <43..>194 CDD:227223 46/133 (35%)
LRR_4 47..87 CDD:289563 16/39 (41%)
leucine-rich repeat 49..71 CDD:275380 9/21 (43%)
leucine-rich repeat 72..95 CDD:275380 10/22 (45%)
leucine-rich repeat 96..117 CDD:275380 9/20 (45%)
leucine-rich repeat 118..140 CDD:275380 8/21 (38%)
leucine-rich repeat 141..164 CDD:275380 4/22 (18%)
lrrc57NP_001002627.1 LRR 1 10..36 3/7 (43%)
LRR_RI <37..191 CDD:238064 52/153 (34%)
LRR 2 37..62 6/24 (25%)
leucine-rich repeat 40..65 CDD:275380 7/24 (29%)
LRR_8 62..119 CDD:290566 24/56 (43%)
LRR 3 64..82 7/17 (41%)
leucine-rich repeat 66..85 CDD:275380 7/18 (39%)
LRR 4 83..106 10/22 (45%)
leucine-rich repeat 86..108 CDD:275380 10/21 (48%)
LRR 5 108..128 9/19 (47%)
leucine-rich repeat 109..131 CDD:275380 10/21 (48%)
LRR 6 129..152 10/23 (43%)
leucine-rich repeat 132..154 CDD:275380 8/22 (36%)
LRR 7 154..173 3/19 (16%)
leucine-rich repeat 155..176 CDD:275380 4/21 (19%)
LRR 8 174..199 4/14 (29%)
leucine-rich repeat 177..198 CDD:275380 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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