DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11044 and KDM2B

DIOPT Version :9

Sequence 1:NP_611456.1 Gene:CG11044 / 37281 FlyBaseID:FBgn0034484 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_011537169.1 Gene:KDM2B / 84678 HGNCID:13610 Length:1353 Species:Homo sapiens


Alignment Length:126 Identity:25/126 - (19%)
Similarity:43/126 - (34%) Gaps:46/126 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WKIDGDEKACYIDVDEDEDQDTENMIESNWRYLPDLVLEQIFTYLTPKERYYAGLVCRQWYRAFY 86
            |.:.|.:...::....:..|..|              |:|.:|:..|.          .|..|.|
Human   277 WVLSGKQSDIFLGDRVERCQRIE--------------LKQGYTFFIPS----------GWIHAVY 317

  Fly    87 LP----TVWNNFL-------------VDDRTLTKPKFNYYSGWQFC---LDHMRTQFCLSR 127
            .|    ....|.|             ::|||..:|||.|...::.|   |:  |..:|:::
Human   318 TPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLE--RYVYCVTQ 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11044NP_611456.1 F-box-like 51..94 CDD:289689 8/46 (17%)
KDM2BXP_011537169.1 JmjC 182..257 CDD:214721
cupin_like 229..335 CDD:304367 14/81 (17%)
zf-CXXC <615..651 CDD:251032
PHD_KDM2B 661..722 CDD:277114
F-box-like 1071..1111 CDD:289689
leucine-rich repeat 1105..1129 CDD:275381
AMN1 1121..1310 CDD:187754
leucine-rich repeat 1130..1153 CDD:275381
leucine-rich repeat 1154..1177 CDD:275381
leucine-rich repeat 1178..1217 CDD:275381
leucine-rich repeat 1218..1242 CDD:275381
leucine-rich repeat 1243..1272 CDD:275381
leucine-rich repeat 1273..1297 CDD:275381
leucine-rich repeat 1298..1323 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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