DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11044 and amn1

DIOPT Version :9

Sequence 1:	NP_611456.1	Gene:	CG11044 / 37281	FlyBaseID:	FBgn0034484	Length:	511	Species:	Drosophila melanogaster
Sequence 2:	NP_001038919.1	Gene:	amn1 / 751744	ZFINID:	ZDB-GENE-060825-13	Length:	249	Species:	Danio rerio

Alignment Length:	177	Identity:	36/177 - (20%)
Similarity:	61/177 - (34%)	Gaps:	62/177 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   218 DLHTLKLVDFVLERYEANHLLD--------------EVVCSCCTKMRVLNLVNVTTM-------- 260
            ||...|:.|..|::..:.||..              ||:...|..::|::|...|.:
Zfish    63 DLQNCKISDSALKQINSLHLRTILLRGCAEITSEGLEVLAPRCPYLQVVDLTGCTAVTDSGIQAL 127

  Fly   261 --HCPIMHVGLFLNLQVLTISPQNIDDDVLSLLADTKLRHLHLLQNCYTPSHLT----------I 313
              ||..:.|........|:      |..:|.|..:.|:  ||.:.  ::.:.:|          :
Zfish   128 ARHCKCLEVISLRGCSALS------DKALLELGGNCKM--LHSIY--FSGTEVTDQGVIGLATGV 182

  Fly   314 SACGVKAWRNVKKTNPRLRVHLRLENLTDGEVVLQPEAPVHSITYCA 360
            .:|.:|..:.|           |..||||..|..       .:|.||
Zfish   183 CSCSLKELQMV-----------RCRNLTDLAVTA-------VLTNCA 211

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11044	NP_611456.1	F-box-like	51..94	CDD:289689
amn1	NP_001038919.1	AMN1	33..248	CDD:187754	36/177 (20%)
		leucine-rich repeat	59..72	CDD:275381	3/8 (38%)
		leucine-rich repeat	82..107	CDD:275381	4/24 (17%)
		leucine-rich repeat	108..133	CDD:275381	5/24 (21%)
		leucine-rich repeat	134..159	CDD:275381	5/30 (17%)
		leucine-rich repeat	160..186	CDD:275381	3/27 (11%)
		leucine-rich repeat	187..212	CDD:275381	11/43 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900