DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11044 and fbxl8

DIOPT Version :9

Sequence 1:NP_611456.1 Gene:CG11044 / 37281 FlyBaseID:FBgn0034484 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001032499.2 Gene:fbxl8 / 641481 ZFINID:ZDB-GENE-051120-81 Length:367 Species:Danio rerio


Alignment Length:408 Identity:93/408 - (22%)
Similarity:154/408 - (37%) Gaps:104/408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LPDLVLEQIFTYLTPKERYYAGLVCRQWYRAFYLPTVWNNFLVDDRTLTKPKFNYYSGWQFCLDH 118
            ||:.:|..||::|..:::..|.:||:.|......|:.|.:..|...:.|.....|          
Zfish     3 LPEEILAHIFSFLPLQDKCNAFIVCKAWSNIMTHPSSWKDTEVRCESGTSVPDRY---------- 57

  Fly   119 MRTQFCLSRIGRYVRGIEFRPWHSFNNIFQFMTMLTWNIDKGREVNPDTQFIGIGSRIRTLVYHF 183
                   |.:...||.::.|  .|..:.....|.| |.:.:.        ..|...|:..|  ..
Zfish    58 -------SDLLPLVRNLKLR--ISLTDPANRKTAL-WVLQQA--------VAGGDGRLEGL--SI 102

  Fly   184 PCNMSQPNDPEGIKLFGTGGQLLRVLKELLLRLTDL--HTLKLVDFVLERYEANHLLDEVVCS-- 244
            .|..:.|       ||..|..|.:.|.::|...:.|  ..||.|.|.|.        |..|.|  
Zfish   103 CCVANTP-------LFYAGQDLQQGLVDILTNGSSLTIFDLKGVPFTLS--------DSFVRSVA 152

  Fly   245 -CCTKMR---------VLNLVNVTTMH----CPIMHVGLFLNLQVLTISPQNIDDDV---LSLLA 292
             .|..::         |..:.:.|..|    ||        :|.||.:...::..||   |.|..
Zfish   153 MLCPALKSLYINNQSLVCGVTSETLRHVLKSCP--------SLNVLGVFQASLSQDVFQDLMLPE 209

  Fly   293 DTKLRHLHLLQNCYTPSHLTISACGVKAWRNVKKTNPRLRVHLRLEN-LTDGEV--VLQPEAPVH 354
            ...|:.|.|  .|......|:..|. :.|..||:.:|||.|.|.|:: |.:..|  ||||..||.
Zfish   210 RPALKKLEL--RCERSLKYTVPLCD-QIWLEVKRRHPRLCVELELDHTLPELHVPGVLQPSIPVR 271

  Fly   355 SI-----TYCAPQTRIRAELLVRMVDHYKSTLAVYGHELLPRFSSPKPFHSRIDSLMLLMCRQCF 414
            .:     |....:.||..:.       |..||.|...:.:|   ||:     ::|.::::.::|.
Zfish   272 CLRLLTWTLLLDEVRIVGQC-------YADTLEVLELQTVP---SPE-----LNSELIVLAQRCV 321

  Fly   415 NVDTL----IIREKVSTS 428
            .:..:    ::.::|.|:
Zfish   322 RLQEVHCYCVVSQEVITA 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11044NP_611456.1 F-box-like 51..94 CDD:289689 12/39 (31%)
fbxl8NP_001032499.2 F-box-like 2..41 CDD:289689 11/37 (30%)
leucine-rich repeat 131..157 CDD:275381 10/33 (30%)
leucine-rich repeat 158..186 CDD:275381 5/35 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1216869at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.