DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11044 and fbxl3l

DIOPT Version :10

Sequence 1:NP_611456.1 Gene:CG11044 / 37281 FlyBaseID:FBgn0034484 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_693270.2 Gene:fbxl3l / 564855 ZFINID:ZDB-GENE-130530-598 Length:448 Species:Danio rerio


Alignment Length:459 Identity:93/459 - (20%)
Similarity:160/459 - (34%) Gaps:136/459 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ENMIESNWRYLPDLVLEQIFTYLTPKERYYAGLVCRQWYRAFYLPTVWNNFLVDDRTLTKPKFNY 108
            :|..|..|..||..|:..||.||:..:|..|..|||:|...|::|.:|..|              
Zfish    49 QNATEETWGNLPHHVVLHIFQYLSLVDRARASSVCRRWNEVFHIPDLWRRF-------------- 99

  Fly   109 YSGWQFCLDHMRTQFCLSRIGRYVRGIEFRPWHSFNNIFQFMTMLTWNIDKGRE----------- 162
                :|.|:...|.:..|.....::.|..|  |:     |.:..:::.:|...|           
Zfish   100 ----EFELNQPATSYLRSTHPDLIQQIIKR--HA-----QHLQYVSFKVDSCTESAEAACNILSQ 153

  Fly   163 -VNPDTQFIGIGSRIRTLVYHFPCNMSQPNDPEGIKLFGTGGQLLRVLKELLLRLTDLHTLKLVD 226
             ||...:.:|:.|..|...    .::||             ...:..|..:.:....|.::|:.|
Zfish   154 LVNCTIKTLGLISTARPSF----MDVSQ-------------SHFVSALTVVFVNSKSLSSIKIDD 201

  Fly   227 FVLERYEANHLLDEVVCSCCTKMRVLNLVNVTTMHCPIMHV---GLFL------NLQVLTISPQN 282
            ..::    :..|..:|.:....:::|.:.:     ||  ||   |:..      .|:.|.::...
Zfish   202 TPVD----DPSLKVLVANNSDTLKLLKMSS-----CP--HVSPAGILCVADQCHGLRELALNYHL 255

  Fly   283 IDDDVLSLLADTKLRHLHLLQNCYTPSHLTISAC----GVKAWRNVKKTN-PRLRVHLRLENLT- 341
            :.|::|..|:..|  |:||       .||.|...    |...:..:||:: ..|..|....|:. 
Zfish   256 LSDELLLALSSEK--HVHL-------EHLRIDVVSENPGQTQFHTIKKSSWDALIRHSPQVNIVM 311

  Fly   342 -------DGEVVLQPEAPVHSITY------------------------CAPQTRIRAELLVRMVD 375
                   :.|...:.|.||..:.:                        ||.......|.|:|:.|
Zfish   312 YFFLYEEEFEPFFREETPVTHLYFGRAVSKDMLGRIGLNCPRLVELVVCANGLEPLDEELIRIAD 376

  Fly   376 HYKSTLAVYGHELLPRFSSPKPFHSRIDSLMLLMCRQCFNVDTLIIREKVSTSTLLLIAKTAKNL 440
            ..||..|:...|.....|....|        :.||..  .:..|.|.|:|      ||.....|:
Zfish   377 RCKSLTAIGLGECEVTCSGFMEF--------VKMCGG--RLSQLSIMEEV------LIPDNTYNI 425

  Fly   441 QHLH 444
            :.:|
Zfish   426 EQIH 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11044NP_611456.1 F-box_SF 51..97 CDD:459239 18/45 (40%)
fbxl3lXP_693270.2 F-box_FBXL21 54..96 CDD:438950 16/41 (39%)
FBXL3_LRR-like 99..448 CDD:480268 74/409 (18%)
leucine-rich repeat 194..218 CDD:275381 5/27 (19%)
leucine-rich repeat 220..245 CDD:275381 6/31 (19%)
leucine-rich repeat 246..271 CDD:275381 7/26 (27%)
leucine-rich repeat 272..306 CDD:275381 9/40 (23%)
leucine-rich repeat 307..353 CDD:275381 5/45 (11%)
leucine-rich repeat 354..380 CDD:275381 6/25 (24%)
leucine-rich repeat 381..403 CDD:275381 4/29 (14%)

Return to query results.
Submit another query.