DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11044 and AMN1

DIOPT Version :9

Sequence 1:NP_611456.1 Gene:CG11044 / 37281 FlyBaseID:FBgn0034484 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001106873.1 Gene:AMN1 / 196394 HGNCID:27281 Length:258 Species:Homo sapiens


Alignment Length:250 Identity:68/250 - (27%)
Similarity:94/250 - (37%) Gaps:73/250 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 SRIRTLVYHFPCNMSQPNDPEGIKLFGTGGQLL-RVLKELL---LRLTDLHTLKLVDFVLERYEA 234
            ||..|.:...|.|:..    ..||:....||:. ..:.|:|   ::..||.:..:.|..|     
Human    23 SRYLTDIKPLPPNIKD----RLIKIMSMQGQITDSNISEILHPEVQTLDLRSCDISDAAL----- 78

  Fly   235 NHLLDEVVCSCCTKMRVLNL-------VNVTT-------MHCPIMH---------------VGLF 270
            .||      |.|.|::.|||       |:||:       ..|..:|               |.|.
Human    79 LHL------SNCRKLKKLNLNASKGNRVSVTSEGIKAVASSCSYLHEASLKRCCNLTDEGVVALA 137

  Fly   271 LNLQVLTISPQNIDDDVLSLLADTKL----RHLHLLQNCYTPSHLTISACGVKAWRNVKKTNPRL 331
            ||.|:|.|    ||......:.|..|    ::...|| |...|...:|..||.|..:........
Human   138 LNCQLLKI----IDLGGCLSITDVSLHALGKNCPFLQ-CVDFSATQVSDSGVIALVSGPCAKKLE 197

  Fly   332 RVHL-RLENLTDGEVVLQPEAPVHSITYCAPQTRIRAELLVR----MVDHYKSTL 381
            .:|: ...|||||.|    ||   .:||| ||.||   ||..    :.||.:..|
Human   198 EIHMGHCVNLTDGAV----EA---VLTYC-PQIRI---LLFHGCPLITDHSREVL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11044NP_611456.1 F-box-like 51..94 CDD:289689
AMN1NP_001106873.1 AMN1 37..257 CDD:187754 62/235 (26%)
leucine-rich repeat 63..86 CDD:275381 8/33 (24%)
leucine-rich repeat 87..116 CDD:275381 7/28 (25%)
leucine-rich repeat 117..142 CDD:275381 5/24 (21%)
leucine-rich repeat 143..168 CDD:275381 6/28 (21%)
leucine-rich repeat 169..195 CDD:275381 8/26 (31%)
leucine-rich repeat 196..221 CDD:275381 12/32 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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