DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment JUP and arm

DIOPT Version :10

Sequence 1:XP_047291890.1 Gene:JUP / 3728 HGNCID:6207 Length:762 Species:Homo sapiens
Sequence 2:NP_476665.2 Gene:arm / 31151 FlyBaseID:FBgn0000117 Length:843 Species:Drosophila melanogaster


Alignment Length:726 Identity:459/726 - (63%)
Similarity:554/726 - (76%) Gaps:27/726 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     2 RTLRFCGERNCPSIATMEVMNLMEQPIKVTEWQQ-TYTYDSGIHSGANTCVPSVSSKGIMEEDEA 65
            ||:....:.|.|.:..|  ::..||.:.   ||| :|..||||||||.|.|||:|.|   |::|.
  Fly     9 RTMSHNNQYNPPDLPPM--VSAKEQTLM---WQQNSYLGDSGIHSGAVTQVPSLSGK---EDEEM 65

Human    66 CGRQYTLKKTTTYTQGVPPSQ-GDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVE-GQAT 128
            .|........|.:.|.....| .|:..|:|.| |::|||.||.|... |:...:.:||.: .|.|
  Fly    66 EGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQT-RSQRVRAAMFPETL-EEGIEIPSTQFDPQQPT 128

Human   129 NLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASR 193
            .:|||:||||:||.|:|:||||||||||||||:|||.|||||||.|||::|||:|:|||||||||
  Fly   129 AVQRLSEPSQMLKHAVVNLINYQDDAELATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASR 193

Human   194 RALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVES 258
            .|:|.|||:|||:||.:.|::||::.:.....||||||||:|||||||||||||||::|||||||
  Fly   194 HAIMNSPQMVAALVRAISNSNDLESTKAAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVES 258

Human   259 VLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLII 323
            ||||||||||||||:|:|:|||||||.||||||.||.:||.|||||.|||||:||||||||||||
  Fly   259 VLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVTLLQRNNVKFLAIVTDCLQILAYGNQESKLII 323

Human   324 LANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQN 388
            ||:|||..||:|||:|.||||||||||||||||||.|||||||:|||||||..||.:.|||||||
  Fly   324 LASGGPNELVRIMRSYDYEKLLWTTSRVLKVLSVCSSNKPAIVDAGGMQALAMHLGNMSPRLVQN 388

Human   389 CLWTLRNLSDVATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVE 453
            ||||||||||.|||.||||::|:.||..|...||||:|||.|.||||||||.:||..|.|..||:
  Fly   389 CLWTLRNLSDAATKVEGLEALLQSLVQVLGSTDVNVVTCAAGILSNLTCNNQRNKATVCQVGGVD 453

Human   454 ALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKAT 518
            ||:..|:.|||:::||||||||||||||||.::|:|||:||||||:..|||||:.|::|||:||.
  Fly   454 ALVRTIINAGDREEITEPAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVKLLHPPSRWPLIKAV 518

Human   519 IGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRH----VAAGTQQP--YTDGVRMEEIV 577
            |||||||||||||||||:|...|..||:||::|.||.:|.    ...|:|||  |.|||||||||
  Fly   519 IGLIRNLALCPANHAPLREHGAIHHLVRLLMRAFQDTERQRSSIATTGSQQPSAYADGVRMEEIV 583

Human   578 EGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEG 642
            ||..||||||||:..||..|.:.:.||:||:||::.:|||||||||||||||.|||.|:.|:.||
  Fly   584 EGTVGALHILARESHNRALIRQQSVIPIFVRLLFNEIENIQRVAAGVLCELAADKEGAEIIEQEG 648

Human   643 ASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEAA------- 700
            |:.||.:||||||||.||||||||||:||||..||:||:|:||||||.:.|...|..|       
  Fly   649 ATGPLTDLLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSIELTNSLLREDNNIWANADLGMGPD 713

Human   701 -QSMIPINEPY 710
             |.|:...|.|
  Fly   714 LQDMLGPEEAY 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JUPXP_047291890.1 CTNNAbd_CTNNG 90..159 CDD:439242 37/69 (54%)
armadillo repeat 161..186 CDD:293788 17/24 (71%)
armadillo repeat 203..229 CDD:293788 10/25 (40%)
armadillo repeat 238..270 CDD:293788 29/31 (94%)
Arm 238..270 CDD:425727 29/31 (94%)
armadillo repeat 278..314 CDD:293788 28/35 (80%)
armadillo repeat 322..355 CDD:293788 26/32 (81%)
PLN03200 <345..>675 CDD:215629 230/335 (69%)
ARM 358..398 CDD:214547 32/39 (82%)
armadillo repeat 362..397 CDD:293788 28/34 (82%)
armadillo repeat 410..435 CDD:293788 14/24 (58%)
armadillo repeat 443..481 CDD:293788 23/37 (62%)
armadillo repeat 487..525 CDD:293788 26/37 (70%)
armadillo repeat 532..589 CDD:293788 36/62 (58%)
armadillo repeat 594..628 CDD:293788 20/33 (61%)
armadillo repeat 635..669 CDD:293788 24/33 (73%)
armNP_476665.2 CTNNAbd_dArm 85..159 CDD:439243 39/75 (52%)
Adaptin_N <150..>314 CDD:396262 124/163 (76%)
armadillo repeat 161..186 CDD:293788 17/24 (71%)
armadillo repeat 193..231 CDD:293788 18/37 (49%)
armadillo repeat 238..270 CDD:293788 29/31 (94%)
armadillo repeat 278..314 CDD:293788 28/35 (80%)
armadillo repeat 320..355 CDD:293788 28/34 (82%)
Arm 361..398 CDD:425727 30/36 (83%)
armadillo repeat 362..397 CDD:293788 28/34 (82%)
armadillo repeat 410..435 CDD:293788 14/24 (58%)
Arm 439..481 CDD:425727 25/41 (61%)
armadillo repeat 443..481 CDD:293788 23/37 (62%)
armadillo repeat 490..525 CDD:293788 24/34 (71%)
Arm 597..636 CDD:425727 23/38 (61%)
armadillo repeat 600..636 CDD:293788 22/35 (63%)
armadillo repeat 641..675 CDD:293788 24/33 (73%)

Return to query results.
Submit another query.